RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 GREB1LQ9C091 1923 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 hCG_1642624A0A1W2PR95 340 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 FRMD3A2A2Y4 597 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ZNF233A6NK53 670 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 SOBPA7XYQ1 873 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 IDEP14735 1019 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 RFC4P35249 363 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 PDE6BP35913 854 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MMP14P50281 582 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 CTBSQ01459 385 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 GSTM4Q03013 218 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 FSTL1Q12841 308 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 AGBL2Q5U5Z8 902 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 SMIM5Q71RC9 77 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 DDX42Q86XP3 938 aaKnown RBP eCLIP4.27□□□□□ -1.73
CLTC-209ENST00000498711 PMM1Q92871 262 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 TRIM47Q96LD4 638 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 C8orf48Q96LL4 319 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MBOAT7Q96N66 472 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ZIM3Q96PE6 472 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 RUSC1Q9BVN2 902 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MLXIPQ9HAP2 919 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 CEP72Q9P209 647 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 FBXL5Q9UKA1 691 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ZNF214Q9UL59 606 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 TTC7AQ9ULT0 858 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 NAV1Q8NEY1 1877 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 IGKV6D-41A0A0C4DH26 115 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 FAM86C2PA6NEL3 165 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MYMKA6NI61 221 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 PP2D1A8MPX8 630 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 PLD2O14939 933 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 AXIN1O15169 862 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 NMT2O60551 498 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 DNAJA2O60884 412 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 RASSF9O75901 435 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MOCS3O95396 460 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 SERPING1P05155 500 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 PLEKP08567 350 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 SNHG28P0DPA3 235 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 HNRNPH1P31943 449 aaKnown RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 NAP1L1P55209 391 aaKnown RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 NPEPPSP55786 919 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 POU5F1Q01860 360 aaKnown RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 ITGB3BPQ13352 177 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 SPA17Q15506 151 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 GNPTABQ3T906 1256 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 FNDC3BQ53EP0 1204 aaKnown RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 FKBP15Q5T1M5 1219 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 GDF6Q6KF10 455 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 CCDC70Q6NSX1 233 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 IFT20Q8IY31 132 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ACTRT1Q8TDG2 376 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 RAD54LQ92698 747 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 KISS1RQ969F8 398 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 CENPTQ96BT3 561 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 DNAJC19Q96DA6 116 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 MTMR8Q96EF0 704 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 CCDC42Q96M95 316 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 CRACR2AQ9BSW2 395 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 LRRC27Q9C0I9 530 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 NYXQ9GZU5 481 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ISCUQ9H1K1 167 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 GANQ9H2C0 597 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 AVENQ9NQS1 362 aaPredicted RBP4.27□□□□□ -1.73
CLTC-209ENST00000498711 KLHL3Q9UH77 587 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 ADAM30Q9UKF2 790 aa4.27□□□□□ -1.73
CLTC-209ENST00000498711 A0A0A6YYK5 440 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 VGLL3A8MV65 326 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 HMGB1P1B2RPK0 211 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 EBAG9O00559 213 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 MEFVO15553 781 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 GNA14O95837 355 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 GLI1P08151 1106 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CYP2D6P10635 497 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 FCER1AP12319 257 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 UBA7P41226 1012 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 PRKCIP41743 596 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 MAGEA1P43355 309 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 GYG1P46976 350 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ZNF143P52747 638 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 GNGT1P63211 74 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CYP27A1Q02318 531 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 PTGISQ16647 500 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CRIPAKQ8N1N5 446 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 LRRC57Q8N9N7 239 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NEDD1Q8NHV4 660 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CASKIN2Q8WXE0 1202 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 SLC7A3Q8WY07 619 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 RELTQ969Z4 430 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CCDC47Q96A33 483 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 PBKQ96KB5 322 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 EXOC2Q96KP1 924 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CDC6Q99741 560 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 DHRS4Q9BTZ2 278 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 IFIH1Q9BYX4 1025 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms