RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 LILRB3O75022 631 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 PPP6R2O75170 966 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 TBCAO75347 108 aaKnown RBP16.79■□□□□ 0.28
NUP50-219ENST00000497960 ADH1AP07327 375 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 EPCAMP16422 314 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 SCP2P22307 547 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 OSTNP61366 133 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
NUP50-219ENST00000497960 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 KHSRPQ92945 711 aaKnown RBP eCLIP16.79■□□□□ 0.28
NUP50-219ENST00000497960 ACAP3Q96P50 834 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 ADAM7Q9H2U9 754 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 ZHX3Q9H4I2 956 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 MYH11P35749 1972 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.282e-7■■■■■ 41.4
NUP50-219ENST00000497960 TOM1L1O75674 476 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 EFEMP2O95967 443 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
NUP50-219ENST00000497960 PROZP22891 400 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 ME1P48163 572 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 NCKAP1LP55160 1127 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 DSG1Q02413 1049 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 ELMSAN1Q6PJG2 1045 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 ZPBP2Q6X784 338 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 HAUS6Q7Z4H7 955 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 GPR65Q8IYL9 337 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 CEP120Q8N960 986 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 LRRC15Q8TF66 581 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
NUP50-219ENST00000497960 BICD1Q96G01 975 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 NECTIN4Q96NY8 510 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
NUP50-219ENST00000497960 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP50-219ENST00000497960 ANKFY1Q9P2R3 1169 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
NUP50-219ENST00000497960 K7ENM7 598 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 CLDN3O15551 220 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 DCXO43602 365 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 MTHFRP42898 656 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP50-219ENST00000497960 CLCN4P51793 760 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 ZNF131P52739 623 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 CREMQ03060 361 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.28
NUP50-219ENST00000497960 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP50-219ENST00000497960 RARS2Q5T160 578 aaKnown RBP16.77■□□□□ 0.28
NUP50-219ENST00000497960 HASPINQ8TF76 798 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
NUP50-219ENST00000497960 RPGRIP1Q96KN7 1286 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 UROC1Q96N76 676 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 PAAF1Q9BRP4 392 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 RXFP1Q9HBX9 757 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 GDPD2Q9HCC8 539 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 DPP7Q9UHL4 492 aa16.77■□□□□ 0.28
NUP50-219ENST00000497960 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 LOC730098B7Z3J9 87 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 ABLIM1O14639 778 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 TEX28O15482 410 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 TRAK2O60296 914 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 CUTAO60888 179 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 KIF4AO95239 1232 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 GLUD1P00367 558 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 ABCD1P33897 745 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 NAB2Q15742 525 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 TMEM31Q5JXX7 168 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 ATAT1Q5SQI0 421 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 C12orf76Q8N812 135 aaPredicted RBP16.76■□□□□ 0.27
NUP50-219ENST00000497960 KCNN1Q92952 543 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
NUP50-219ENST00000497960 B3GALT6Q96L58 329 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
NUP50-219ENST00000497960 SFXN1Q9H9B4 322 aa16.76■□□□□ 0.27
NUP50-219ENST00000497960 B3GAT3O94766 335 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 LIG4P49917 911 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 MCL1Q07820 350 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 ALKAL1Q6UXT8 129 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 SV2BQ7L1I2 683 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms