RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 KIAA0355O15063 1070 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 PJA2O43164 708 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 ZSCAN20P17040 1043 aaPredicted RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 ECHS1P30084 290 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 RNASE9P60153 205 aaKnown RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 MUM1L1Q5H9M0 696 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 EPHA10Q5JZY3 1008 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 FAM180AQ6UWF9 173 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 ZNF572Q7Z3I7 529 aaPredicted RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 RD3Q7Z3Z2 195 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 TRMT2AQ8IZ69 625 aaKnown RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 RNF169Q8NCN4 708 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 BEND2Q8NDZ0 799 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 ZFP28Q8NHY6 868 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 SLC35B2Q8TB61 432 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 COG1Q8WTW3 980 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 FAM126AQ9BYI3 521 aaPredicted RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 TMX1Q9H3N1 280 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 CYP4F11Q9HBI6 524 aa4.55□□□□□ -1.68
VPS26A-208ENST00000497022 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
VPS26A-208ENST00000497022 ATRNL1Q5VV63 1379 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 PHLDB1Q86UU1 1377 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 CENPVL1A0A0U1RR11 272 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 GAGE12BA1L429 117 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 GAGE12HA6NDE8 117 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 TMEM200CA6NKL6 621 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 CXorf49A8MYA2 514 aaPredicted RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 RNASET2O00584 256 aaKnown RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 WNT10BO00744 389 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 ZNF185O15231 689 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 NCR1O76036 304 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 ALOX15P16050 662 aaPredicted RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 SREBF1P36956 1147 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 MCAMP43121 646 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 MTNR1BP49286 362 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 CLK3P49761 638 aaKnown RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 CLRN1P58418 232 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 ERVK-21P61565 698 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 MALLQ13021 153 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 ZNF362Q5T0B9 420 aaPredicted RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 GJC2Q5T442 439 aaPredicted RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 METRNLQ641Q3 311 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 ATL2Q8NHH9 583 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 TEX101Q9BY14 249 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 DMRT3Q9NQL9 472 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 CCM2LQ9NUG4 571 aaPredicted RBP4.54□□□□□ -1.68
VPS26A-208ENST00000497022 DNAJC28Q9NX36 388 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 DKK2Q9UBU2 259 aa4.54□□□□□ -1.68
VPS26A-208ENST00000497022 PNPLA7Q6ZV29 1317 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 DRGXA6NNA5 263 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 PROB1E7EW31 1015 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 K7ESF4 209 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 LPXNO60711 386 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 NDUFA10O95299 355 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 SNRPA1P09661 255 aaKnown RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 SLC5A3P53794 718 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 SP140Q13342 867 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 NOMO1Q15155 1222 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 PDCD4Q53EL6 469 aaKnown RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 FAM102AQ5T9C2 384 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 Q6YL49 198 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 PLXDC1Q8IUK5 500 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 PQLC1Q8N2U9 271 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 FBXO18Q8NFZ0 1043 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 HOXB13Q92826 284 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 NELL1Q92832 810 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 UHRF1Q96T88 793 aaPredicted RBP4.53□□□□□ -1.68
VPS26A-208ENST00000497022 R3HDMLQ9H3Y0 253 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 ZBTB21Q9ULJ3 1066 aa4.53□□□□□ -1.68
VPS26A-208ENST00000497022 OSMP13725 252 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 GSPT1P15170 499 aaKnown RBP4.52□□□□□ -1.69
VPS26A-208ENST00000497022 GUCY1A2P33402 732 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 BMPR1AP36894 532 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 CHN2P52757 468 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 PER3P56645 1201 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 BEAN1Q3B7T3 259 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 RRP12Q5JTH9 1297 aaKnown RBP4.52□□□□□ -1.69
VPS26A-208ENST00000497022 STON2Q8WXE9 905 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 NEU1Q99519 415 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 ADI1Q9BV57 179 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
VPS26A-208ENST00000497022 WASHC2AQ641Q2 1341 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ARHGEF17Q96PE2 2063 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ENDOD1O94919 500 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SPATA31D3P0C874 917 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 IL2RBP14784 551 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ZEB1P37275 1124 aaPredicted RBP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 USP14P54578 494 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 MGAT2Q10469 447 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SEPT2Q15019 361 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 AGAP9Q5VTM2 703 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 AFMIDQ63HM1 303 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 SPATA31D4Q6ZUB0 917 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 MICALCLQ6ZW33 695 aa4.51□□□□□ -1.69
VPS26A-208ENST00000497022 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS26A-208ENST00000497022 ARHGEF19Q8IW93 802 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms