RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
NEK4-206ENST00000496822 PDGFBP01127 241 aaPredicted RBP16.56■□□□□ 0.24
NEK4-206ENST00000496822 PLA2G4BP0C869 781 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 PROZP22891 400 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 FAM171A1Q5VUB5 890 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 ZDHHC14Q8IZN3 488 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 ZNF707Q96C28 371 aaPredicted RBP16.56■□□□□ 0.24
NEK4-206ENST00000496822 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 TIPINQ9BVW5 301 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 C17orf75Q9HAS0 396 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.56■□□□□ 0.24
NEK4-206ENST00000496822 FNIP2Q9P278 1114 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 USTQ9Y2C2 406 aa16.56■□□□□ 0.24
NEK4-206ENST00000496822 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 N4BP1O75113 896 aaKnown RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 PLS3P13797 630 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 SOX4Q06945 474 aaPredicted RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 MTMR3Q13615 1198 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 LILRA6Q6PI73 481 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 CD300LGQ6UXG3 332 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 GPR65Q8IYL9 337 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 C3orf58Q8NDZ4 430 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 LNX1Q8TBB1 728 aaPredicted RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 PIK3R5Q8WYR1 880 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 ZBTB45Q96K62 511 aaPredicted RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 SNX27Q96L92 541 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 TTPALQ9BTX7 342 aa16.55■□□□□ 0.24
NEK4-206ENST00000496822 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
NEK4-206ENST00000496822 CLUHO75153 1309 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 SMIM28A0A1B0GU29 152 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 TMEM189-UBE2V1I3L0A0 370 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 ADAM12O43184 909 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 MCF2P10911 925 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 CLCNKBP51801 687 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 VCPP55072 806 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 CREMQ03060 361 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 PSMD5Q16401 504 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 XKR4Q5GH76 650 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 MPZL3Q6UWV2 235 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 APBB1IPQ7Z5R6 666 aaPredicted RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 FBXL6Q8N531 539 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 AK8Q96MA6 479 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 ZMAT2Q96NC0 199 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 CLSTN3Q9BQT9 956 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 NTPCRQ9BSD7 190 aaKnown RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
NEK4-206ENST00000496822 BLOC1S4Q9NUP1 217 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 WDFY4Q6ZS81 3184 aa16.54■□□□□ 0.24
NEK4-206ENST00000496822 VWA8A3KMH1 1905 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 I3L4J1 428 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 B3GAT3O94766 335 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 PAPLNO95428 1278 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 PLCG1P19174 1290 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
NEK4-206ENST00000496822 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
NEK4-206ENST00000496822 UPP1Q16831 310 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 SEZ6Q53EL9 994 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 IER5LQ5T953 404 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 OTOP3Q7RTS5 596 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 KCTD17Q8N5Z5 321 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 HDAC7Q8WUI4 952 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 REEP2Q9BRK0 252 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 TCHPQ9BT92 498 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 WDR6Q9NNW5 1121 aaKnown RBP16.53■□□□□ 0.24
NEK4-206ENST00000496822 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
NEK4-206ENST00000496822 ANKFY1Q9P2R3 1169 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 DPP7Q9UHL4 492 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 FBXW11Q9UKB1 542 aa16.53■□□□□ 0.24
NEK4-206ENST00000496822 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 FGFR3P22607 806 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 BRCC3P46736 316 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 NCKAP1LP55160 1127 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 ELAVL2Q12926 359 aaKnown RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 STRN3Q13033 797 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 RESTQ13127 1097 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 NOLC1Q14978 699 aaKnown RBP eCLIP16.52■□□□□ 0.24
NEK4-206ENST00000496822 ELMSAN1Q6PJG2 1045 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 RSPO2Q6UXX9 243 aaPredicted RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 PRSS33Q8NF86 280 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 C18orf25Q96B23 403 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms