RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 NCKAP1LP55160 1127 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 SPAG1Q07617 926 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 GIT2Q14161 759 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-246ENST00000496569 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 KIAA0319Q5VV43 1072 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 MPZL3Q6UWV2 235 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 DYMQ7RTS9 669 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 RIN2Q8WYP3 895 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-246ENST00000496569 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 PPP1R10Q96QC0 940 aaKnown RBP13.39□□□□□ -0.27
HDLBP-246ENST00000496569 TCHPQ9BT92 498 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 TIPINQ9BVW5 301 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 PHF7Q9BWX1 381 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-246ENST00000496569 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
HDLBP-246ENST00000496569 SCN1AP35498 2009 aa13.39□□□□□ -0.27
HDLBP-246ENST00000496569 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 ADAM12O43184 909 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 NR1I2O75469 434 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 TADA2AO75478 443 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 TNFSF9P41273 254 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 BRCC3P46736 316 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 CLCNKBP51801 687 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 DSG1Q02413 1049 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 STRN3Q13033 797 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
HDLBP-246ENST00000496569 KIAA1841Q6NSI8 718 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 HAUS6Q7Z4H7 955 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 MYCT1Q8N699 235 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-246ENST00000496569 BICD1Q96G01 975 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 SNX27Q96L92 541 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-246ENST00000496569 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 MAN1C1Q9NR34 630 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
HDLBP-246ENST00000496569 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
HDLBP-246ENST00000496569 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 TSC2P49815 1807 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 CARNS1A5YM72 827 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 MYMKA6NI61 221 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 DCXO43602 365 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 RFPL2O75678 378 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 CXCL8P10145 99 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 MCF2P10911 925 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 COL9A1P20849 921 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.279e-7■■■■■ 26.8
HDLBP-246ENST00000496569 ZNF131P52739 623 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SMTNP53814 917 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 STK38Q15208 465 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 FAM171A1Q5VUB5 890 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SLC39A4Q6P5W5 647 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 CD300LGQ6UXG3 332 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SFR1Q86XK3 245 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 PDILTQ8N807 584 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 STAMQ92783 540 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 TBC1D7Q9P0N9 293 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
HDLBP-246ENST00000496569 TUBGCP4Q9UGJ1 667 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 ODF2LQ9ULJ1 636 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 NOTCH4Q99466 2003 aa13.37□□□□□ -0.27
HDLBP-246ENST00000496569 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■■■ 78.1
HDLBP-246ENST00000496569 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 C2CD4DB7Z1M9 353 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 SLC26A4O43511 780 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
HDLBP-246ENST00000496569 NASPP49321 788 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-246ENST00000496569 GUCY2FP51841 1108 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 SLC10A6Q3KNW5 377 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
HDLBP-246ENST00000496569 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
HDLBP-246ENST00000496569 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms