RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SAAL1Q96ER3 474 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 RGS18Q9NS28 235 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 A0A1B0GUA9 196 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ODC1P11926 461 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 PRCPP42785 496 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ECM1Q16610 540 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 PLEKHG4Q58EX7 1191 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 CMTR2Q8IYT2 770 aaKnown RBP9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ADSSL1Q8N142 457 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 RNF214Q8ND24 703 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 TAF4BQ92750 862 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 NUP58Q9BVL2 599 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ENTPD7Q9NQZ7 604 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 FAM50BQ9Y247 325 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ZNF623O75123 536 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CSDE1O75534 798 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 RECQL4O94761 1208 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TBXAS1P24557 533 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 PCSK1P29120 753 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 GTF2H1P32780 548 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ACOT2P49753 483 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 STK4Q13043 487 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 BRSK2Q8IWQ3 736 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 GOLGA1Q92805 767 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CHAMP1Q96JM3 812 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 GCNAQ96QF7 691 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 NUCKS1Q9H1E3 243 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CDT1Q9H211 546 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 IPPQ9Y573 584 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 COL11A1P12107 1806 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ENPP3O14638 875 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 IKBKBO14920 756 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MAPK13O15264 365 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 P4HA2O15460 535 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 RB1P06400 928 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MFAP3P55082 362 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ZNF699Q32M78 642 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 LIN9Q5TKA1 542 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 WDR49Q8IV35 697 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TMEM175Q9BSA9 504 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ADAMTS10Q9H324 1103 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 WRAP73Q9P2S5 460 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ITGA11Q9UKX5 1188 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 PRG3Q9Y2Y8 225 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 KCNJ18B7U540 433 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ATICP31939 592 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 UBASH3AP57075 661 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 UBXN1Q04323 297 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TUSC3Q13454 348 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 KCNJ12Q14500 433 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MAPRE1Q15691 268 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 SGSM1Q2NKQ1 1148 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CEP57Q86XR8 500 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 HELQQ8TDG4 1101 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TNIP3Q96KP6 325 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 GAD1Q99259 594 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 C2CD2Q9Y426 696 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 A0A1W2PPC1 479 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 B3GAT3O94766 335 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 PIGRP01833 764 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 CHRNA1P02708 482 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ANXA13P27216 316 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MCL1Q07820 350 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 VEPH1Q14D04 833 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 BMT2Q1RMZ1 405 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 FOXR2Q6PJQ5 311 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 ENOSF1Q7L5Y1 443 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 C12orf56Q8IXR9 622 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TDHQ8IZJ6 230 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 HERVK_113Q902F9 699 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TGS1Q96RS0 853 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MED10Q9BTT4 135 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 SEPT11Q9NVA2 429 aaKnown RBP9.31□□□□□ -0.92
U2AF1-212ENST00000496462 AGAP1Q9UPQ3 857 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 TRAF3IP3Q9Y228 551 aa9.31□□□□□ -0.92
U2AF1-212ENST00000496462 MCM3APO60318 1980 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 RLFQ13129 1914 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 SF3B1O75533 1304 aaKnown RBP eCLIP9.3□□□□□ -0.92
U2AF1-212ENST00000496462 GPR32O75388 356 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 IGHA2P01877 340 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CASP1P29466 404 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 SNW1Q13573 536 aaKnown RBP9.3□□□□□ -0.92
U2AF1-212ENST00000496462 TRIM14Q14142 442 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
U2AF1-212ENST00000496462 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 DCLRE1AQ6PJP8 1040 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CGRRF1Q99675 332 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms