RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 POLD4Q9HCU8 107 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 STK24Q9Y6E0 443 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 CLUHO75153 1309 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 H0Y858 1186 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 KIF4AO95239 1232 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 C1RP00736 705 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 THP07101 528 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 CREMQ03060 361 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 PTPAQ15257 358 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 RTP2Q5QGT7 225 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 EEF1DP3Q658K8 133 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 ASTLQ6HA08 431 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-208ENST00000496375 LILRA6Q6PI73 481 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 PRSS55Q6UWB4 352 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-208ENST00000496375 STAMQ92783 540 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 RAB34Q9BZG1 259 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 BHMT2Q9H2M3 363 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 PIDD1Q9HB75 910 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 DUSP12Q9UNI6 340 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 KIAA1024Q9UPX6 916 aa15.83■□□□□ 0.12
CXCL12-208ENST00000496375 F13A1P00488 732 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 DDIT3P35638 169 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-208ENST00000496375 PKP1Q13835 747 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 SF3A1Q15459 793 aaKnown RBP15.82■□□□□ 0.12
CXCL12-208ENST00000496375 DCAF4L1Q3SXM0 396 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 FAM171A1Q5VUB5 890 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 DTHD1Q6ZMT9 781 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 FLCNQ8NFG4 579 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 SNX29Q8TEQ0 813 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 KIFAP3Q92845 792 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 TTPALQ9BTX7 342 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 PRKD2Q9BZL6 878 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 DDX19AQ9NUU7 478 aaKnown RBP15.82■□□□□ 0.12
CXCL12-208ENST00000496375 ZDHHC7Q9NXF8 308 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 IGSF9Q9P2J2 1179 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 EPS15L1Q9UBC2 864 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 DOCK8Q8NF50 2099 aa15.82■□□□□ 0.12
CXCL12-208ENST00000496375 SLC26A4O43511 780 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 NARSO43776 548 aaKnown RBP15.81■□□□□ 0.12
CXCL12-208ENST00000496375 PAPLNO95428 1278 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 CLCN5P51795 746 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 EFNA5P52803 228 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 NAB2Q15742 525 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 NT5DC1Q5TFE4 455 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 ATF7IP2Q5U623 682 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
CXCL12-208ENST00000496375 KCTD17Q8N5Z5 321 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 RSAD2Q8WXG1 361 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 PIK3R5Q8WYR1 880 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 AK8Q96MA6 479 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 USP28Q96RU2 1077 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 MYADMQ96S97 322 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 CLSTN3Q9BQT9 956 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 FBXL21Q9UKT6 434 aa15.81■□□□□ 0.12
CXCL12-208ENST00000496375 TRIP11Q15643 1979 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 VWA8A3KMH1 1905 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 ZMYND10O75800 440 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 PSMD5Q16401 504 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 HYIQ5T013 277 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 ATL3Q6DD88 541 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 FAM173BQ6P4H8 233 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-208ENST00000496375 LNX1Q8TBB1 728 aaPredicted RBP15.8■□□□□ 0.12
CXCL12-208ENST00000496375 FBXW11Q9UKB1 542 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 ZDHHC9Q9Y397 364 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 VPS13AQ96RL7 3174 aa15.8■□□□□ 0.12
CXCL12-208ENST00000496375 DOCK6Q96HP0 2047 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 E9PMD0 336 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 K7ERI5 159 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 GFRA3O60609 400 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 NPR3P17342 541 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 AOC1P19801 751 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 ELAVL2Q12926 359 aaKnown RBP15.79■□□□□ 0.12
CXCL12-208ENST00000496375 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 SIX5Q8N196 739 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
CXCL12-208ENST00000496375 MMTAG2Q9BU76 263 aaKnown RBP15.79■□□□□ 0.12
CXCL12-208ENST00000496375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.79■□□□□ 0.12
CXCL12-208ENST00000496375 ZFHX2Q9C0A1 2572 aaPredicted RBP15.79■□□□□ 0.12
CXCL12-208ENST00000496375 PHLPP2Q6ZVD8 1323 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 CFAP54Q96N23 3096 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 CCDC169A6NNP5 214 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 PP2D1A8MPX8 630 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 ADAM12O43184 909 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 YEATS4O95619 227 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 CFHP08603 1231 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 LONP1P36776 959 aaKnown RBP15.78■□□□□ 0.12
CXCL12-208ENST00000496375 NPTX2P47972 431 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 PEX3P56589 373 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 LIN9Q5TKA1 542 aa15.78■□□□□ 0.12
CXCL12-208ENST00000496375 KRT79Q5XKE5 535 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms