RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 POP1Q99575 1024 aaKnown RBP23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 MICAL3Q7RTP6 2002 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 LTBP2Q14767 1821 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 ANK1P16157 1881 aa23.67■■□□□ 1.38
ECHDC3-205ENST00000496136 LACTBL1A8MY62 500 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 EOMESO95936 686 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 YARSP54577 528 aaKnown RBP23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 AGMOQ6ZNB7 445 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 HACE1Q8IYU2 909 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 ANKRD20A12PQ8NF67 263 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 SLC35C1Q96A29 364 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 CXCL16Q9H2A7 254 aa23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.66■■□□□ 1.38
ECHDC3-205ENST00000496136 ABHD14A-ACY1A0A1B0GW23 586 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 IBSPP21815 317 aaPredicted RBP23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 FANCCQ00597 558 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 ENPEPQ07075 957 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 C1orf220Q5T0J3 134 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 RNF169Q8NCN4 708 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 PGBD4Q96DM1 585 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 PLEKHA5Q9HAU0 1116 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 TOPORSQ9NS56 1045 aaPredicted RBP23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 TAB2Q9NYJ8 693 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 KLK14Q9P0G3 267 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 NR2E3Q9Y5X4 410 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 IL18RAPO95256 599 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 DLATP10515 647 aaKnown RBP23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 PRKCSHP14314 528 aaPredicted RBP23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 CLDN10P78369 228 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 MAN2A1Q16706 1144 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 DCAF17Q5H9S7 520 aaPredicted RBP23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 MIIPQ5JXC2 388 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 TCERG1LQ5VWI1 586 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 CRIPAKQ8N1N5 446 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 FNBP1Q96RU3 617 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 VPS16Q9H269 839 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 ASB7Q9H672 318 aa23.65■■□□□ 1.38
ECHDC3-205ENST00000496136 LRRIQ3A6PVS8 624 aaPredicted RBP23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 SERPINC1P01008 464 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 TRIM49P0CI25 452 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 TRIM49CP0CI26 452 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 COPB1P53618 953 aaKnown RBP23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 EPHB4P54760 987 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 SURF1Q15526 300 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 USP37Q86T82 979 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 CD302Q8IX05 232 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 SNX27Q96L92 541 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 ELAC1Q9H777 363 aaKnown RBP23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 GRPEL1Q9HAV7 217 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 TMEM161AQ9NX61 479 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 GIT1Q9Y2X7 761 aa23.64■■□□□ 1.37
ECHDC3-205ENST00000496136 CEP290O15078 2479 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 AP5Z1O43299 807 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 PLCB2Q00722 1185 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 PPP2R3AQ06190 1150 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 KCNH2Q12809 1159 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 XKR4Q5GH76 650 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 ZNF365Q70YC5 407 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 OTOP2Q7RTS6 562 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 ZNF516Q92618 1163 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 NAP1L5Q96NT1 182 aaPredicted RBP23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 LBHD1Q9BQE6 289 aaPredicted RBP23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 FGBP02675 491 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 TNNI1P19237 187 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 PPP3CAQ08209 521 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 VWA3BQ502W6 1294 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 GSTCDQ8NEC7 633 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 ZFP42Q96MM3 310 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 ZMAT2Q96NC0 199 aaKnown RBP23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 NDST4Q9H3R1 872 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 UBN1Q9NPG3 1134 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 RNF19AQ9NV58 838 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 CNTN3Q9P232 1028 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 PCDHB7Q9Y5E2 793 aa23.63■■□□□ 1.37
ECHDC3-205ENST00000496136 PTPRJQ12913 1337 aa23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 ACTN1P12814 892 aa23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 AFF1P51825 1210 aaKnown RBP23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 LMBRD2Q68DH5 695 aaPredicted RBP23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 JADE1Q6IE81 842 aa23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 GAD1Q99259 594 aa23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 RSAD1Q9HA92 442 aa23.62■■□□□ 1.37
ECHDC3-205ENST00000496136 SMIM28A0A1B0GU29 152 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 ARL5CA6NH57 179 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 EFCAB14O75071 495 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 BAIAP3O94812 1187 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 MLH1P40692 756 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 UBASH3AP57075 661 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 TMEM240Q5SV17 173 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 WDR49Q8IV35 697 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 EFCAB13Q8IY85 973 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 FAM84AQ96KN4 292 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 CGRRF1Q99675 332 aa23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.61■■□□□ 1.37
ECHDC3-205ENST00000496136 OFD1O75665 1012 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 NFICP08651 508 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 GCLMP48507 274 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 SARM1Q6SZW1 724 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 OR5B17Q8NGF7 314 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 MMRN2Q9H8L6 949 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms