RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RNF186Q9NXI6 227 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 TRPA1O75762 1119 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
HLA-A-208ENST00000496081 ANXA13P27216 316 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 GJA9P57773 515 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 CACNB2Q08289 660 aaPredicted RBP17.69■□□□□ 0.42
HLA-A-208ENST00000496081 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 NT5C1BQ96P26 610 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 TSGA10Q9BZW7 698 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
HLA-A-208ENST00000496081 ADAMTS10Q9H324 1103 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 L2HGDHQ9H9P8 463 aa17.69■□□□□ 0.42
HLA-A-208ENST00000496081 PJA2O43164 708 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 VNN1O95497 513 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 CYP2C9P11712 490 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
HLA-A-208ENST00000496081 MFAP3P55082 362 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 KIZQ2M2Z5 673 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 CEP120Q8N960 986 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 OR5B17Q8NGF7 314 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 TATDN2Q93075 761 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 ELMO3Q96BJ8 720 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 PI4K2AQ9BTU6 479 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 PCNTO95613 3336 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 UQCRHLA0A096LP55 91 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 GPR25O00155 361 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 SEPT4O43236 478 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 TSPAN1O60635 241 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
HLA-A-208ENST00000496081 GPR32O75388 356 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 HLA-DRAP01903 254 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 UQCRHP07919 91 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 TMEM62Q0P6H9 643 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 BIRC3Q13489 604 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 CPB2Q96IY4 423 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 SYT11Q9BT88 431 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 UPF3AQ9H1J1 476 aaKnown RBP17.68■□□□□ 0.42
HLA-A-208ENST00000496081 PDZD7Q9H5P4 517 aa17.68■□□□□ 0.42
HLA-A-208ENST00000496081 TRIP12Q14669 1992 aaPredicted RBP17.68■□□□□ 0.42
HLA-A-208ENST00000496081 THSD7BQ9C0I4 1608 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 TREHO43280 583 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 URI1O94763 535 aaPredicted RBP17.67■□□□□ 0.42
HLA-A-208ENST00000496081 PGK1P00558 417 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 PIK3CAP42336 1068 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 OSTNP61366 133 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
HLA-A-208ENST00000496081 CDC42EP1Q00587 391 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
HLA-A-208ENST00000496081 VPS36Q86VN1 386 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 FAM71AQ8IYT1 594 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 SHC3Q92529 594 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 LUC7LQ9NQ29 371 aaKnown RBP17.67■□□□□ 0.42
HLA-A-208ENST00000496081 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 NAGPAQ9UK23 515 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 NENFQ9UMX5 172 aa17.67■□□□□ 0.42
HLA-A-208ENST00000496081 MACROD2A1Z1Q3 448 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 C17orf102A2RUQ5 167 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 DDX3XO00571 662 aaKnown RBP eCLIP17.66■□□□□ 0.427e-28■■■□□ 14.6
HLA-A-208ENST00000496081 KPNA6O60684 536 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 ERLIN2O94905 339 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 MCF2P10911 925 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 ELNP15502 786 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 HOXC8P31273 242 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 AP3M2P53677 418 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 GCNT1Q02742 428 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 SURF1Q15526 300 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 TMEM192Q8IY95 271 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 SLC30A5Q8TAD4 765 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 ANK1P16157 1881 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 RARBP10826 455 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
HLA-A-208ENST00000496081 NKX3-2P78367 333 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 NAB2Q15742 525 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 WDR44Q5JSH3 913 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 C10orf76Q5T2E6 689 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 ALKBH5Q6P6C2 394 aaKnown RBP17.66■□□□□ 0.42
HLA-A-208ENST00000496081 C7orf31Q8N865 590 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 LNX1Q8TBB1 728 aaPredicted RBP17.66■□□□□ 0.42
HLA-A-208ENST00000496081 CD99L2Q8TCZ2 262 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 DNAJB3Q8WWF6 145 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 SECISBP2LQ93073 1101 aaKnown RBP17.66■□□□□ 0.42
HLA-A-208ENST00000496081 PACSIN1Q9BY11 444 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
HLA-A-208ENST00000496081 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 SRRDQ9UH36 339 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
HLA-A-208ENST00000496081 CEP350Q5VT06 3117 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms