RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ZPBP2Q6X784 338 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 KLHL5Q96PQ7 755 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 USP28Q96RU2 1077 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 PHF7Q9BWX1 381 aaPredicted RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 TOPORSQ9NS56 1045 aaPredicted RBP14.46□□□□□ -0.1
ERCC3-209ENST00000494464 CHST7Q9NS84 486 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 GDAQ9Y2T3 454 aa14.46□□□□□ -0.1
ERCC3-209ENST00000494464 GOLGA6L3A6NEY3 463 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 LOC730098B7Z3J9 87 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 TOM1L1O75674 476 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 EPCAMP16422 314 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
ERCC3-209ENST00000494464 CLCN4P51793 760 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 KIAA0319Q5VV43 1072 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 CEP120Q8N960 986 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 NECTIN4Q96NY8 510 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 PPP1R10Q96QC0 940 aaKnown RBP14.45□□□□□ -0.1
ERCC3-209ENST00000494464 CCDC94Q9BW85 323 aaPredicted RBP14.45□□□□□ -0.1
ERCC3-209ENST00000494464 ADAM7Q9H2U9 754 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 EPHX3Q9H6B9 360 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 RXFP1Q9HBX9 757 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.45□□□□□ -0.1
ERCC3-209ENST00000494464 STK17AQ9UEE5 414 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
ERCC3-209ENST00000494464 SF3B1O75533 1304 aaKnown RBP eCLIP14.45□□□□□ -0.1
ERCC3-209ENST00000494464 NPHP3-ACAD11A0A0J9YXS1 232 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CASTOR2A6NHX0 329 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 TMEM189-UBE2V1I3L0A0 370 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 DCXO43602 365 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 FAM13AO94988 1023 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 KIF4AO95239 1232 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 C1RP00736 705 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 ADH1AP07327 375 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 ALADP13716 330 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 TXLNAP40222 546 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 NASPP49321 788 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-209ENST00000494464 YARSP54577 528 aaKnown RBP14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-209ENST00000494464 MCM6Q14566 821 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 NOLC1Q14978 699 aaKnown RBP eCLIP14.44□□□□□ -0.1
ERCC3-209ENST00000494464 SLC39A14Q15043 492 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 USP41Q3LFD5 358 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 ZSCAN23Q3MJ62 389 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CES5AQ6NT32 575 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 USP49Q70CQ1 688 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 TAS1R1Q7RTX1 841 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 EPSTI1Q96J88 318 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 PAAF1Q9BRP4 392 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 GPR62Q9BZJ7 368 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CXCL16Q9H2A7 254 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 SFXN1Q9H9B4 322 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 PARVGQ9HBI0 331 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CACNG4Q9UBN1 327 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 CCDC39Q9UFE4 941 aa14.44□□□□□ -0.1
ERCC3-209ENST00000494464 C2CD2LO14523 706 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
ERCC3-209ENST00000494464 KLRC2P26717 231 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 ABCD1P33897 745 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 CREMQ03060 361 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 ELAVL2Q12926 359 aaKnown RBP14.43□□□□□ -0.1
ERCC3-209ENST00000494464 DHX8Q14562 1220 aaKnown RBP14.43□□□□□ -0.1
ERCC3-209ENST00000494464 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 SPECC1Q5M775 1068 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 KIAA1841Q6NSI8 718 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 ALKAL1Q6UXT8 129 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 HAUS6Q7Z4H7 955 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
ERCC3-209ENST00000494464 SNX27Q96L92 541 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 FBXL18Q96ME1 805 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 UROC1Q96N76 676 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 ZNF396Q96N95 335 aaPredicted RBP14.43□□□□□ -0.1
ERCC3-209ENST00000494464 APOL5Q9BWW9 433 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 FNIP2Q9P278 1114 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 VWA8A3KMH1 1905 aa14.43□□□□□ -0.1
ERCC3-209ENST00000494464 C2orf16Q68DN1 1984 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 K7ENM7 598 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 TEX28O15482 410 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 GPR37L1O60883 481 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 TBCAO75347 108 aaKnown RBP14.42□□□□□ -0.1
ERCC3-209ENST00000494464 TADA2AO75478 443 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 PIGRP01833 764 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 KRT18P05783 430 aaKnown RBP14.42□□□□□ -0.1
ERCC3-209ENST00000494464 KCNE1P15382 129 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 MTHFRP42898 656 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 CEBPZQ03701 1054 aaKnown RBP14.42□□□□□ -0.1
ERCC3-209ENST00000494464 MCL1Q07820 350 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 HERC4Q5GLZ8 1057 aaPredicted RBP14.42□□□□□ -0.1
ERCC3-209ENST00000494464 ELMSAN1Q6PJG2 1045 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 ZBTB33Q86T24 672 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 RNF135Q8IUD6 432 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 LEO1Q8WVC0 666 aaPredicted RBP14.42□□□□□ -0.1
ERCC3-209ENST00000494464 RABGGTAQ92696 567 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 RIPOR3Q96MK2 946 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 CLIC6Q96NY7 704 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 ACAP3Q96P50 834 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 FIZ1Q96SL8 496 aa14.42□□□□□ -0.1
ERCC3-209ENST00000494464 TCHPQ9BT92 498 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms