RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 FBXL13Q8NEE6 735 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 CD101Q93033 1021 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 ATP6V0A1Q93050 837 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 OSGEPQ9NPF4 335 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 SSC5DA1L4H1 1573 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 MANSC4A6NHS7 340 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 FOXN3O00409 490 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 PSTPIP1O43586 416 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 DNAJC8O75937 253 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 YWHABP31946 246 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 LBX1P52954 281 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 MTMR1Q13613 665 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 ARHGAP44Q17R89 818 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 ZC2HC1CQ53FD0 456 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 BRDTQ58F21 947 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 RNF187Q5TA31 235 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 LIN9Q5TKA1 542 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 CCDC105Q8IYK2 499 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 ART4Q93070 314 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 NTPCRQ9BSD7 190 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 AGO4Q9HCK5 861 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 MRPL47Q9HD33 250 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 PPANQ9NQ55 473 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 KCNH7Q9NS40 1196 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
RFC4-214ENST00000494047 CTDP1Q9Y5B0 961 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 CSADQ9Y600 493 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 O00370 1275 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 RASGRF2O14827 1237 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 CTNND1O60716 968 aaKnown RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 TRIM49P0CI25 452 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 TRIM49CP0CI26 452 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 ITGA4P13612 1032 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 CAP2P40123 477 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 PEX5P50542 639 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 AP3M2P53677 418 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 CACNB3P54284 484 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 KCNA1Q09470 495 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 PPP1R7Q15435 360 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 SNRNP35Q16560 246 aaKnown RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 NLRX1Q86UT6 975 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 RELL1Q8IUW5 271 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 CCDC89Q8N998 374 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 CYP2W1Q8TAV3 490 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 SEC16BQ96JE7 1060 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 ZNF341Q9BYN7 854 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 DPH5Q9H2P9 285 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 INTS9Q9NV88 658 aaKnown RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 SENP1Q9P0U3 644 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 AJAP1Q9UKB5 411 aaPredicted RBP12.29□□□□□ -0.44
RFC4-214ENST00000494047 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
RFC4-214ENST00000494047 FSCN2O14926 492 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 LRRN2O75325 713 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
RFC4-214ENST00000494047 MMEP08473 750 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 COMTP21964 271 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TBXAS1P24557 533 aaPredicted RBP12.28□□□□□ -0.44
RFC4-214ENST00000494047 PTGIRP43119 386 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 MNAT1P51948 309 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 OAZ1P54368 228 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PLTPP55058 493 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 MRPS25P82663 173 aaKnown RBP12.28□□□□□ -0.44
RFC4-214ENST00000494047 IFT88Q13099 833 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 PTK6Q13882 451 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TKFCQ3LXA3 575 aa12.28□□□□□ -0.44
RFC4-214ENST00000494047 TNFAIP8L3Q5GJ75 292 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms