RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CTSSP25774 331 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 ECHS1P30084 290 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 THBS2P35442 1172 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 SETQ01105 290 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 PFKPQ01813 784 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 TARDBPQ13148 414 aaKnown RBP eCLIP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 PFKFB4Q16877 469 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 C19orf54Q5BKX5 351 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 KANK2Q63ZY3 851 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 TTLL5Q6EMB2 1281 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 VASNQ6EMK4 673 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 RSPH3Q86UC2 560 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 FAM129CQ86XR2 697 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 PDILTQ8N807 584 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 MRGPRX1Q96LB2 322 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 ZSCAN31Q96LW9 406 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 NEUROD6Q96NK8 337 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 SOX7Q9BT81 388 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 MAGEH1Q9H213 219 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 CNTD2Q9H8S5 307 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 CPNE7Q9UBL6 633 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 RGS17Q9UGC6 210 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 DBR1Q9UK59 544 aaKnown RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 TMEM98Q9Y2Y6 226 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 SETD1BQ9UPS6 1966 aaKnown RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 RRN3P2A6NIE6 340 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SYT5O00445 386 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 PSPNO60542 156 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 FSBPO95073 299 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 HPXP02790 462 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 FGFR2P21802 821 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SLC6A9P48067 706 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 HK2P52789 917 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 ARFIP2P53365 341 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 ERVFRD-1P60508 538 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 HTRA4P83105 476 aaPredicted RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 TLE1Q04724 770 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 GRM1Q13255 1194 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SNAPC2Q13487 334 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 PDE1CQ14123 709 aaPredicted RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 TAF12Q16514 161 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SKIDA1Q1XH10 827 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 MST1LQ2TV78 715 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 KHDC1LQ5JSQ8 128 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 EMC10Q5UCC4 262 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 CIAPIN1Q6FI81 312 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 ZNF280DQ6N043 979 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 RETSATQ6NUM9 610 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 MZT2BQ6NZ67 158 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 DPP8Q6V1X1 898 aaPredicted RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 CATSPERGQ6ZRH7 1159 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 TXLNBQ8N3L3 684 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 GALNT15Q8N3T1 639 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 CCDC89Q8N998 374 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SLC30A5Q8TAD4 765 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 CYP2W1Q8TAV3 490 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 SNX33Q8WV41 574 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 IQCDQ96DY2 449 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 DYDC2Q96IM9 177 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 VRK1Q99986 396 aaPredicted RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 TRIM54Q9BYV2 358 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 DPH1Q9BZG8 443 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 BCO1Q9HAY6 547 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 RXFP1Q9HBX9 757 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 POLR3BQ9NW08 1133 aaPredicted RBP5.24□□□□□ -1.57
GTF3A-208ENST00000493903 DACT1Q9NYF0 836 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 COL20A1Q9P218 1284 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 GRHPRQ9UBQ7 328 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 CPA4Q9UI42 421 aa5.24□□□□□ -1.57
GTF3A-208ENST00000493903 TRIM43BA6NCK2 446 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 CLCA1A8K7I4 914 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 NPC1O15118 1278 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 THAP12O43422 761 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SNX2O60749 519 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 LY86O95711 162 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 EFEMP2O95967 443 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 PYGLP06737 847 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 ANXA2P07355 339 aaKnown RBP5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SYN1P17600 705 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 ITGB5P18084 799 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 POLD1P28340 1107 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SERPINF1P36955 418 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 NKX3-2P78367 333 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 FSTL1Q12841 308 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 POSTNQ15063 836 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 KLHDC7AQ5VTJ3 777 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 C1orf122Q6ZSJ8 110 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 AMIGO3Q86WK7 504 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 UNC5BQ8IZJ1 945 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 SH2D3CQ8N5H7 860 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 OR6B3Q8NGW1 331 aa5.23□□□□□ -1.57
GTF3A-208ENST00000493903 TRIM43Q96BQ3 446 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms