RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 CRYGNQ8WXF5 182 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 VWCEQ96DN2 955 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 Q96M66 194 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 GBP4Q96PP9 640 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 MROH8Q9H579 483 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 MAP3K20Q9NYL2 800 aaKnown RBP7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CYP39A1Q9NYL5 469 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 FBXO40Q9UH90 709 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CFAP45Q9UL16 551 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 NOL7Q9UMY1 257 aaKnown RBP7.41□□□□□ -1.22
TRA2B-216ENST00000493864 PLAGL2Q9UPG8 496 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 A0A0G2JMZ2 1700 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 C9IYK1 514 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 CCNT1O60563 726 aaKnown RBP7.4□□□□□ -1.22
TRA2B-216ENST00000493864 TDP2O95551 362 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 PGK2P07205 417 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 FCER1AP12319 257 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 MARCKSP29966 332 aaPredicted RBP7.4□□□□□ -1.22
TRA2B-216ENST00000493864 MCM7P33993 719 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 COPB2P35606 906 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 SREBF1P36956 1147 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 TRAPPC10P48553 1259 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 CCNA1P78396 465 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 TNK2Q07912 1038 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 SLC39A14Q15043 492 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 STK38Q15208 465 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 IFI16Q16666 785 aaKnown RBP7.4□□□□□ -1.22
TRA2B-216ENST00000493864 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 FAM110CQ1W6H9 321 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 NEK8Q86SG6 692 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 PPFIBP1Q86W92 1011 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
TRA2B-216ENST00000493864 DTWD2Q8NBA8 298 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 LINC00301Q8NCQ3 95 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 IL31RAQ8NI17 732 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 UIMC1Q96RL1 719 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 RMDN3Q96TC7 470 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 MMP19Q99542 508 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 MAF1Q9H063 256 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 LMBRD1Q9NUN5 540 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 KCNH3Q9ULD8 1083 aa7.4□□□□□ -1.22
TRA2B-216ENST00000493864 DDX49Q9Y6V7 483 aaKnown RBP7.4□□□□□ -1.22
TRA2B-216ENST00000493864 MYH7BA7E2Y1 1941 aa7.4□□□□□ -1.23
TRA2B-216ENST00000493864 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.23
TRA2B-216ENST00000493864 ASTN1O14525 1302 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 RPTORQ8N122 1335 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 DNAJC25-GNG10A0A024R161 153 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 CYP3A7-CYP3A51PA0A087WV96 503 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 SPTLC2O15270 562 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 MED26O95402 600 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 YEATS4O95619 227 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 CYP3A4P08684 503 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 MYCLP12524 364 aaPredicted RBP7.39□□□□□ -1.23
TRA2B-216ENST00000493864 CYP3A7P24462 503 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 SLC7A5Q01650 507 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 KCTD2Q14681 263 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 BBS9Q3SYG4 887 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 ARHGEF16Q5VV41 709 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 VSIG10LQ86VR7 867 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 SPACA3Q8IXA5 215 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 FAM133AQ8N9E0 248 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 CYP2W1Q8TAV3 490 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 ARMC5Q96C12 935 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 MBOAT7Q96N66 472 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 SCAND2PQ9GZW5 306 aaPredicted RBP7.39□□□□□ -1.23
TRA2B-216ENST00000493864 TMEM60Q9H2L4 133 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 PXMP2Q9NR77 195 aa7.39□□□□□ -1.23
TRA2B-216ENST00000493864 TNRC18O15417 2968 aaPredicted RBP7.39□□□□□ -1.23
TRA2B-216ENST00000493864 KIAA0100Q14667 2235 aaKnown RBP7.39□□□□□ -1.23
TRA2B-216ENST00000493864 PFASO15067 1338 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 SLC15A5A6NIM6 579 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 FAM86B1E9PN63 330 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 MEIS1O00470 390 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 KLF4O43474 513 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 STRNO43815 780 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 SLC37A4O43826 429 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 FAM86B2P0C5J1 330 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 ADORA2AP29274 412 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 CTGFP29279 349 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 MAPK4P31152 587 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 CIITAP33076 1130 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 ME1P48163 572 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 MRPS9P82933 396 aaKnown RBP7.38□□□□□ -1.23
TRA2B-216ENST00000493864 GRIN1Q05586 938 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 PGM5Q15124 567 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 IL17AQ16552 155 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 PRR16Q569H4 304 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 PPP4R3AQ6IN85 833 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 GPR142Q7Z601 462 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 PIWIL2Q8TC59 973 aaKnown RBP7.38□□□□□ -1.23
TRA2B-216ENST00000493864 NSUN6Q8TEA1 469 aaKnown RBP7.38□□□□□ -1.23
TRA2B-216ENST00000493864 GJA10Q969M2 543 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 FGD4Q96M96 766 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 HSPA12BQ96MM6 686 aa7.38□□□□□ -1.23
TRA2B-216ENST00000493864 CLIC6Q96NY7 704 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms