RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 MAPTP10636 758 aaKnown RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 MCF2P10911 925 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 HARSP12081 509 aaKnown RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 RPL17P18621 184 aaKnown RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 IGFBP6P24592 240 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 MARCKSP29966 332 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 SMTNP53814 917 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 MCM6Q14566 821 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 SPECC1Q5M775 1068 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 PRSS55Q6UWB4 352 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-207ENST00000492954 GPR149Q86SP6 731 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 GLYCTKQ8IVS8 523 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 RAD54LQ92698 747 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 EDAQ92838 391 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 REEP2Q9BRK0 252 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 TCHPQ9BT92 498 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 MTMR6Q9Y217 621 aa19.76■□□□□ 0.75
PTPRU-207ENST00000492954 BRD1O95696 1058 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 SPATA31D3P0C874 917 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 YARSP54577 528 aaKnown RBP19.75■□□□□ 0.75
PTPRU-207ENST00000492954 ZXDAP98168 799 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 FAM171A1Q5VUB5 890 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 SPATA31D4Q6ZUB0 917 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 CEP57Q86XR8 500 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 PALB2Q86YC2 1186 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 GPR65Q8IYL9 337 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 GOLGA2P5Q9HBQ8 144 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTPRU-207ENST00000492954 TOPORSQ9NS56 1045 aaPredicted RBP19.75■□□□□ 0.75
PTPRU-207ENST00000492954 FNIP2Q9P278 1114 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 LARSQ9P2J5 1176 aaKnown RBP19.75■□□□□ 0.75
PTPRU-207ENST00000492954 ANKFY1Q9P2R3 1169 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 KCNG1Q9UIX4 513 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 ODF2LQ9ULJ1 636 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 HCN4Q9Y3Q4 1203 aa19.75■□□□□ 0.75
PTPRU-207ENST00000492954 SMIM28A0A1B0GU29 152 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 TOM1L1O75674 476 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 NCKAP1LP55160 1127 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 CEBPZQ03701 1054 aaKnown RBP19.74■□□□□ 0.75
PTPRU-207ENST00000492954 XKR4Q5GH76 650 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 ALKAL1Q6UXT8 129 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 HFE2Q6ZVN8 426 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 USP49Q70CQ1 688 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 EPSTI1Q96J88 318 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 SNX27Q96L92 541 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 ACAP3Q96P50 834 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 TTPALQ9BTX7 342 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 FBXO2Q9UK22 296 aaPredicted RBP19.74■□□□□ 0.75
PTPRU-207ENST00000492954 TECTAO75443 2155 aa19.74■□□□□ 0.75
PTPRU-207ENST00000492954 MEFVO15553 781 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 TGM5O43548 720 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 RFPL2O75678 378 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 B3GAT3O94766 335 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 FAM13AO94988 1023 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CLCNKBP51801 687 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CREMQ03060 361 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 SOX4Q06945 474 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 ELAVL2Q12926 359 aaKnown RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 NOLC1Q14978 699 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 PTPN21Q16825 1174 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 C15orf39Q6ZRI6 1047 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CMASQ8NFW8 434 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 PIK3R5Q8WYR1 880 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 UROC1Q96N76 676 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 ZMAT2Q96NC0 199 aaKnown RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CLIC6Q96NY7 704 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CCSER1Q9C0I3 900 aa19.73■□□□□ 0.75
PTPRU-207ENST00000492954 SRPRBQ9Y5M8 271 aaKnown RBP19.73■□□□□ 0.75
PTPRU-207ENST00000492954 CCDC195A0A1B0GUA6 201 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 TMEM189-UBE2V1I3L0A0 370 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 KRT18P05783 430 aaKnown RBP19.72■□□□□ 0.75
PTPRU-207ENST00000492954 PLXNA3P51805 1871 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 ZNF131P52739 623 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 UPP1Q16831 310 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 SEZ6Q53EL9 994 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 ELMSAN1Q6PJG2 1045 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 DCLRE1AQ6PJP8 1040 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 CD300LGQ6UXG3 332 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 ZPBP2Q6X784 338 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 TRIM67Q6ZTA4 783 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 CCDC149Q6ZUS6 474 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 HAUS6Q7Z4H7 955 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 MYCT1Q8N699 235 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 TDRD5Q8NAT2 981 aaKnown RBP19.72■□□□□ 0.75
PTPRU-207ENST00000492954 C3orf58Q8NDZ4 430 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 LARP4BQ92615 738 aaKnown RBP19.72■□□□□ 0.75
PTPRU-207ENST00000492954 BICD1Q96G01 975 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 PARVGQ9HBI0 331 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 CNTN3Q9P232 1028 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 DPP7Q9UHL4 492 aa19.72■□□□□ 0.75
PTPRU-207ENST00000492954 TMEM221A6NGB7 291 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 H0YCG3 227 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 K7ENM7 598 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 M0R296 226 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 CLDN3O15551 220 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 STX6O43752 255 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 KCNE1P15382 129 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 MCL1Q07820 350 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 PSMD5Q16401 504 aa19.71■□□□□ 0.75
PTPRU-207ENST00000492954 LILRA6Q6PI73 481 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms