RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 ECM1Q16610 540 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 ATF7IP2Q5U623 682 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 RTP3Q9BQQ7 232 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
MRPL55-231ENST00000492170 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
MRPL55-231ENST00000492170 MTCL1Q9Y4B5 1905 aaKnown RBP16.88■□□□□ 0.29
MRPL55-231ENST00000492170 RFX1P22670 979 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■□□□□ 10
MRPL55-231ENST00000492170 PDIA5Q14554 519 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 NAB2Q15742 525 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-231ENST00000492170 LNX1Q8TBB1 728 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-231ENST00000492170 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 WNT16Q9UBV4 365 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 PHLPP2Q6ZVD8 1323 aa16.87■□□□□ 0.29
MRPL55-231ENST00000492170 PROB1E7EW31 1015 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 TMEM189-UBE2V1I3L0A0 370 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 K7ERI5 159 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 C8AP07357 584 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 CFHP08603 1231 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 HNRNPA1P09651 372 aaKnown RBP eCLIP16.86■□□□□ 0.29
MRPL55-231ENST00000492170 SRFP11831 508 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 LAMP2P13473 410 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 NPR3P17342 541 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 HOXA9P31269 272 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 PTGDRQ13258 359 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 DMP1Q13316 513 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-231ENST00000492170 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 PPM1LQ5SGD2 360 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 NT5DC1Q5TFE4 455 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 SLC44A3Q8N4M1 653 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 DNM3Q9UQ16 869 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
MRPL55-231ENST00000492170 ZFP37Q9Y6Q3 630 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-231ENST00000492170 ZFHX2Q9C0A1 2572 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 DOCK8Q8NF50 2099 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 CCDC169A6NNP5 214 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 STK25O00506 426 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 LAD1O00515 517 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 XYLBO75191 536 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 B3GAT3O94766 335 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 FSHRP23945 695 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 NBL1P41271 181 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 YARSP54577 528 aaKnown RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 PEX3P56589 373 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 CCDC105Q8IYK2 499 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 DRC1Q96MC2 740 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 UROC1Q96N76 676 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-231ENST00000492170 KIF3AQ9Y496 699 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
MRPL55-231ENST00000492170 MYO15AQ9UKN7 3530 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 CFAP54Q96N23 3096 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 PI15O43692 258 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 FGFR3P22607 806 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 PRPHP41219 470 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 GRM5P41594 1212 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 NPTX2P47972 431 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-231ENST00000492170 CLCNKBP51801 687 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 HTR4Q13639 388 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 RABEP1Q15276 862 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 ZNF568Q3ZCX4 644 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 DCLRE1AQ6PJP8 1040 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 MRPL4Q9BYD3 311 aaKnown RBP16.84■□□□□ 0.29
MRPL55-231ENST00000492170 TMEM134Q9H6X4 195 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 MTRRQ9UBK8 725 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 CA14Q9ULX7 337 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 POLIQ9UNA4 740 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 VPS13AQ96RL7 3174 aa16.84■□□□□ 0.29
MRPL55-231ENST00000492170 KRBA1A5PL33 1030 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 ANHXE9PGG2 379 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 E9PMD0 336 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 CCL16O15467 120 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 ADAM12O43184 909 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 HIP1RO75146 1068 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 RAB33AQ14088 237 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 DTHD1Q6ZMT9 781 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 DTWD2Q8NBA8 298 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 ACO2Q99798 780 aaKnown RBP16.83■□□□□ 0.28
MRPL55-231ENST00000492170 CDT1Q9H211 546 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 KMT5AQ9NQR1 393 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 SLC38A7Q9NVC3 462 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 ARHGAP28Q9P2N2 729 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 CDH7Q9ULB5 785 aa16.83■□□□□ 0.28
MRPL55-231ENST00000492170 NUMBLQ9Y6R0 609 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms