RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PLA2G3Q9NZ20 509 aa5.07□□□□□ -1.6
VTA1-204ENST00000491881 GPRC5DQ9NZD1 345 aa5.07□□□□□ -1.6
VTA1-204ENST00000491881 DMRT1Q9Y5R6 373 aa5.07□□□□□ -1.6
VTA1-204ENST00000491881 TNFRSF18Q9Y5U5 241 aa5.07□□□□□ -1.6
VTA1-204ENST00000491881 PMS2P1A4D2B8 440 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 RAMP2O60895 175 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 RPLP2P05387 115 aaKnown RBP5.06□□□□□ -1.6
VTA1-204ENST00000491881 HSPA6P17066 643 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 ATF3P18847 181 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 CRHR1P34998 444 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 CASRP41180 1078 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 WASP42768 502 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 MLC1Q15049 377 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 MINDY4Q4G0A6 757 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 PPP4R3AQ6IN85 833 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 PDZD4Q76G19 769 aaPredicted RBP5.06□□□□□ -1.6
VTA1-204ENST00000491881 ZNF627Q7L945 461 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 CMTM4Q8IZR5 234 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 PQLC1Q8N2U9 271 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 MAGEB6Q8N7X4 407 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 OR7D4Q8NG98 312 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.06□□□□□ -1.6
VTA1-204ENST00000491881 AIFM3Q96NN9 605 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 MAP3K14Q99558 947 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 PRRX2Q99811 253 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 SENP6Q9GZR1 1112 aaPredicted RBP5.06□□□□□ -1.6
VTA1-204ENST00000491881 ZNF703Q9H7S9 590 aaPredicted RBP5.06□□□□□ -1.6
VTA1-204ENST00000491881 BCO1Q9HAY6 547 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 LANCL2Q9NS86 450 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 LIMCH1Q9UPQ0 1083 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 IPPQ9Y573 584 aa5.06□□□□□ -1.6
VTA1-204ENST00000491881 UBE2QL1A1L167 161 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 AP1G1O43747 822 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 PDCP20941 246 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 PTPN7P35236 360 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 SAFB2Q14151 953 aaKnown RBP eCLIP5.05□□□□□ -1.6
VTA1-204ENST00000491881 GRM7Q14831 915 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 SEPT2Q15019 361 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 C3orf36Q3SXR2 165 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 Q6ZVL8 140 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 USP45Q70EL2 814 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 OR2I1PQ8NGU4 316 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 MDM1Q8TC05 714 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 CCHCR1Q8TD31 782 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 HOXB13Q92826 284 aaPredicted RBP5.05□□□□□ -1.6
VTA1-204ENST00000491881 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 PDCD2LQ9BRP1 358 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 GTPBP4Q9BZE4 634 aaKnown RBP5.05□□□□□ -1.6
VTA1-204ENST00000491881 TDP1Q9NUW8 608 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 TRPS1Q9UHF7 1281 aa5.05□□□□□ -1.6
VTA1-204ENST00000491881 ADCY6O43306 1168 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
VTA1-204ENST00000491881 POU2F2P09086 479 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 EDNRBP24530 442 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 SREBF1P36956 1147 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 ADAM8P78325 824 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 IL10RAQ13651 578 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 PGS1Q32NB8 556 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 GFOD2Q3B7J2 385 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 EPM2AIP1Q7L775 607 aaPredicted RBP5.04□□□□□ -1.6
VTA1-204ENST00000491881 ADGRE4PQ86SQ3 457 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 C14orf80Q86SX3 495 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 RSPH3Q86UC2 560 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 DRC7Q8IY82 874 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 GPR135Q8IZ08 494 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 CAMKK1Q8N5S9 505 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 KAT5Q92993 513 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 CYFIP2Q96F07 1278 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 IL17RAQ96F46 866 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 TMEM176AQ96HP8 235 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 NELFAQ9H3P2 528 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 SLC2A4RGQ9NR83 387 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 CEP72Q9P209 647 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 PCDHA13Q9Y5I0 950 aa5.04□□□□□ -1.6
VTA1-204ENST00000491881 CFAP20Q9Y6A4 193 aaKnown RBP5.04□□□□□ -1.6
VTA1-204ENST00000491881 CAPN14A8MX76 684 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 ERC2O15083 957 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 LPOP22079 712 aaPredicted RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 GZMKP49863 264 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 CDC42EP1Q00587 391 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 APBA1Q02410 837 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 PRAMEF14Q5SWL7 426 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 CCDC181Q5TID7 509 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 TTC7BQ86TV6 843 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 TRMT2AQ8IZ69 625 aaKnown RBP5.03□□□□□ -1.6
VTA1-204ENST00000491881 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 REPS2Q8NFH8 660 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 FBXO18Q8NFZ0 1043 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 HPS3Q969F9 1004 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 RAB24Q969Q5 203 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 MVB12AQ96EY5 273 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 C8orf48Q96LL4 319 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 TTPALQ9BTX7 342 aa5.03□□□□□ -1.6
VTA1-204ENST00000491881 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms