RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KCND2Q9NZV8 630 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 ARHGAP28Q9P2N2 729 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 IPPQ9Y573 584 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 MTCH2Q9Y6C9 303 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 TRIP11Q15643 1979 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC151A5D8V7 595 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 MYMKA6NI61 221 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 C5orf67F2Z3F1 127 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 H3BNC9 293 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 ACKR2O00590 384 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 NPTXRO95502 500 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PLS3P13797 630 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 OAS2P29728 719 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 ADKP55263 362 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 E2F4Q16254 413 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 MAPK6Q16659 721 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 HSP90AA4PQ58FG1 418 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 EEF1DP3Q658K8 133 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TOGARAM2Q6ZUX3 1019 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 NTPCRQ9BSD7 190 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TSPYL1Q9H0U9 437 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 STK17AQ9UEE5 414 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 K7ERI5 159 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 POLR2DO15514 142 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 ERCC5P28715 1186 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TXLNAP40222 546 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 RAB27AP51159 221 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 HNRNPH2P55795 449 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TUBB4BP68371 445 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 DMP1Q13316 513 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 GPM6BQ13491 265 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 MORC3Q14149 939 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC85BQ15834 202 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PTPN21Q16825 1174 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 CT47A1Q5JQC4 288 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 DYMQ7RTS9 669 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM161BQ8NDZ6 487 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 MAFAQ8NHW3 353 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 STAMQ92783 540 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 SAMD11Q96NU1 681 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PANX2Q96RD6 677 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 FIZ1Q96SL8 496 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PARD6BQ9BYG5 372 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 NXF3Q9H4D5 531 aaKnown RBP10.24□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 C17orf75Q9HAS0 396 aa10.24□□□□□ -0.77
BRCA1-219ENST00000491747 PRUNE2Q8WUY3 3088 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 AKR1B15C9JRZ8 316 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-219ENST00000491747 GRM6O15303 877 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 B4GALT3O60512 393 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 SASH3O75995 380 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 SKIP12755 728 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 DNAJB1P25685 340 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 PBX3P40426 434 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 STAT6P42226 847 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ZNF131P52739 623 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 EFNA5P52803 228 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 BRD3Q15059 726 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 SLC27A1Q6PCB7 646 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 SPIRE2Q8WWL2 714 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 PPM1EQ8WY54 764 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 DHX58Q96C10 678 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 DNAJC19Q96DA6 116 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC51Q96ER9 411 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ALG13Q9NP73 1137 aaKnown RBP10.23□□□□□ -0.77
BRCA1-219ENST00000491747 MIOSQ9NXC5 875 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ODF2LQ9ULJ1 636 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 PRRC2BQ5JSZ5 2229 aaKnown RBP10.23□□□□□ -0.77
BRCA1-219ENST00000491747 TULP2O00295 520 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 HOXA2O43364 376 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ITGB1P05556 798 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 MAPTP10636 758 aaKnown RBP10.23□□□□□ -0.77
BRCA1-219ENST00000491747 AKAP5P24588 427 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 NCKAP1LP55160 1127 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 TUBB2AQ13885 445 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 CAMK1Q14012 370 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 NR1I3Q14994 352 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 SV2BQ7L1I2 683 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 KLHL23Q8NBE8 558 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 COLGALT1Q8NBJ5 622 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 DDX12PQ92771 950 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 PGBD4Q96DM1 585 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 ACO2Q99798 780 aaKnown RBP10.23□□□□□ -0.77
BRCA1-219ENST00000491747 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 APOL6Q9BWW8 343 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 EPC1Q9H2F5 836 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 RSAD1Q9HA92 442 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 PLAGL2Q9UPG8 496 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 INPP5FQ9Y2H2 1132 aa10.23□□□□□ -0.77
BRCA1-219ENST00000491747 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 KIF5CO60282 957 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 RB1P06400 928 aa10.22□□□□□ -0.77
BRCA1-219ENST00000491747 ITGA4P13612 1032 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms