RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 TRIM67Q6ZTA4 783 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 HFE2Q6ZVN8 426 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 CEP57Q86XR8 500 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 PALB2Q86YC2 1186 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 GPR65Q8IYL9 337 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 PPP1R10Q96QC0 940 aaKnown RBP20.03■□□□□ 0.8
SBDS-204ENST00000490953 NTPCRQ9BSD7 190 aaKnown RBP20.03■□□□□ 0.8
SBDS-204ENST00000490953 PTPRHQ9HD43 1115 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 FNIP2Q9P278 1114 aa20.03■□□□□ 0.8
SBDS-204ENST00000490953 TMEM221A6NGB7 291 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 M0R296 226 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 MCF2P10911 925 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 RPL17P18621 184 aaKnown RBP20.02■□□□□ 0.8
SBDS-204ENST00000490953 ELAVL2Q12926 359 aaKnown RBP20.02■□□□□ 0.8
SBDS-204ENST00000490953 DHX8Q14562 1220 aaKnown RBP20.02■□□□□ 0.8
SBDS-204ENST00000490953 RTP2Q5QGT7 225 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 FAM171A1Q5VUB5 890 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 PRSS55Q6UWB4 352 aaPredicted RBP20.02■□□□□ 0.8
SBDS-204ENST00000490953 C15orf39Q6ZRI6 1047 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 CCDC149Q6ZUS6 474 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 GPBP1Q86WP2 473 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 TMEM161BQ8NDZ6 487 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 LARSQ9P2J5 1176 aaKnown RBP20.02■□□□□ 0.8
SBDS-204ENST00000490953 ANKFY1Q9P2R3 1169 aa20.02■□□□□ 0.8
SBDS-204ENST00000490953 VWA8A3KMH1 1905 aa20.02■□□□□ 0.79
SBDS-204ENST00000490953 SPATA31D3P0C874 917 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
SBDS-204ENST00000490953 PLCG1P19174 1290 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 PROZP22891 400 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 KARSQ15046 597 aaKnown RBP20.01■□□□□ 0.79
SBDS-204ENST00000490953 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 SPATA31D4Q6ZUB0 917 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 CMASQ8NFW8 434 aaPredicted RBP20.01■□□□□ 0.79
SBDS-204ENST00000490953 UROC1Q96N76 676 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 GOLGA2P5Q9HBQ8 144 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 ODF2LQ9ULJ1 636 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 USTQ9Y2C2 406 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 ARIH1Q9Y4X5 557 aaPredicted RBP20.01■□□□□ 0.79
SBDS-204ENST00000490953 CLIC4Q9Y696 253 aa20.01■□□□□ 0.79
SBDS-204ENST00000490953 PDCD11Q14690 1871 aaKnown RBP20.01■□□□□ 0.79
SBDS-204ENST00000490953 TECTAO75443 2155 aa20■□□□□ 0.79
SBDS-204ENST00000490953 SMIM28A0A1B0GU29 152 aa20■□□□□ 0.79
SBDS-204ENST00000490953 CCDC195A0A1B0GUA6 201 aa20■□□□□ 0.79
SBDS-204ENST00000490953 H0YCG3 227 aa20■□□□□ 0.79
SBDS-204ENST00000490953 ABLIM1O14639 778 aa20■□□□□ 0.79
SBDS-204ENST00000490953 TGM5O43548 720 aa20■□□□□ 0.79
SBDS-204ENST00000490953 TOM1L1O75674 476 aa20■□□□□ 0.79
SBDS-204ENST00000490953 BRD1O95696 1058 aa20■□□□□ 0.79
SBDS-204ENST00000490953 SYT1P21579 422 aa20■□□□□ 0.79
SBDS-204ENST00000490953 PLA2G5P39877 138 aa20■□□□□ 0.79
SBDS-204ENST00000490953 CLCNKBP51801 687 aa20■□□□□ 0.79
SBDS-204ENST00000490953 SIGLEC14Q08ET2 396 aa20■□□□□ 0.79
SBDS-204ENST00000490953 RESTQ13127 1097 aa20■□□□□ 0.79
SBDS-204ENST00000490953 NOLC1Q14978 699 aaKnown RBP eCLIP20■□□□□ 0.79
SBDS-204ENST00000490953 PSMD5Q16401 504 aa20■□□□□ 0.79
SBDS-204ENST00000490953 ZDHHC14Q8IZN3 488 aa20■□□□□ 0.79
SBDS-204ENST00000490953 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
SBDS-204ENST00000490953 LRRC15Q8TF66 581 aa20■□□□□ 0.79
SBDS-204ENST00000490953 HDAC7Q8WUI4 952 aa20■□□□□ 0.79
SBDS-204ENST00000490953 PIK3R5Q8WYR1 880 aa20■□□□□ 0.79
SBDS-204ENST00000490953 FAM122AQ96E09 287 aa20■□□□□ 0.79
SBDS-204ENST00000490953 INTS4Q96HW7 963 aaKnown RBP20■□□□□ 0.79
SBDS-204ENST00000490953 ZBTB45Q96K62 511 aaPredicted RBP20■□□□□ 0.79
SBDS-204ENST00000490953 SNX27Q96L92 541 aa20■□□□□ 0.79
SBDS-204ENST00000490953 MFSD14AQ96MC6 490 aa20■□□□□ 0.79
SBDS-204ENST00000490953 ACAP3Q96P50 834 aa20■□□□□ 0.79
SBDS-204ENST00000490953 REEP2Q9BRK0 252 aa20■□□□□ 0.79
SBDS-204ENST00000490953 PLEKHA4Q9H4M7 779 aa20■□□□□ 0.79
SBDS-204ENST00000490953 BLOC1S4Q9NUP1 217 aa20■□□□□ 0.79
SBDS-204ENST00000490953 TMEM189-UBE2V1I3L0A0 370 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 K7ELQ4 463 aaPredicted RBP19.99■□□□□ 0.79
SBDS-204ENST00000490953 RFPL2O75678 378 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 B3GAT3O94766 335 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 FAM13AO94988 1023 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 C1RP00736 705 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
SBDS-204ENST00000490953 MATR3P43243 847 aaKnown RBP eCLIP19.99■□□□□ 0.79
SBDS-204ENST00000490953 NCKAP1LP55160 1127 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 MCM6Q14566 821 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 XKR4Q5GH76 650 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
SBDS-204ENST00000490953 KREMEN2Q8NCW0 462 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 RAD54LQ92698 747 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 ACSF2Q96CM8 615 aaPredicted RBP19.99■□□□□ 0.79
SBDS-204ENST00000490953 BICD1Q96G01 975 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 SORCS3Q9UPU3 1222 aa19.99■□□□□ 0.79
SBDS-204ENST00000490953 MARCKSP29966 332 aaPredicted RBP19.98■□□□□ 0.79
SBDS-204ENST00000490953 MTMR3Q13615 1198 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 PTPAQ15257 358 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 UPP1Q16831 310 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 FAM173BQ6P4H8 233 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 PDXDC1Q6P996 788 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 DCLRE1AQ6PJP8 1040 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 ALKAL1Q6UXT8 129 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 CYP26C1Q6V0L0 522 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 ZPBP2Q6X784 338 aa19.98■□□□□ 0.79
SBDS-204ENST00000490953 OTOP3Q7RTS5 596 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms