RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 HAPLN2Q9GZV7 340 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 ZBP1Q9H171 429 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 CXCL16Q9H2A7 254 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 MARCH5Q9NX47 278 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 CLDND1Q9NY35 253 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 IRAK3Q9Y616 596 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 STYXL1Q9Y6J8 313 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 TRANK1O15050 2925 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 PVALEFA0A1B0GWK0 134 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 C2orf71A6NGG8 1288 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 OGTO15294 1046 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 ACTN4O43707 911 aaKnown RBP18.93■□□□□ 0.62
MDC1-206ENST00000489540 TADA2AO75478 443 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 AFMP43652 599 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 HSP90AA2PQ14568 343 aaPredicted RBP18.93■□□□□ 0.62
MDC1-206ENST00000489540 DUSP6Q16828 381 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 SLC39A4Q6P5W5 647 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 UNC13DQ70J99 1090 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 TMEM87AQ8NBN3 555 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 UROC1Q96N76 676 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 MSTO1Q9BUK6 570 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 TMEM206Q9H813 350 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 CNTN3Q9P232 1028 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 SSX2IPQ9Y2D8 614 aa18.93■□□□□ 0.62
MDC1-206ENST00000489540 CASTOR2A6NHX0 329 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 HIDE1A8MVS5 230 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 PER2O15055 1255 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 SOD2P04179 222 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 MYL1P05976 194 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 MYBP10242 640 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 KCNA5P22460 613 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 GTF2F1P35269 517 aaKnown RBP eCLIP18.92■□□□□ 0.62
MDC1-206ENST00000489540 NDUFA8P51970 172 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 TFF2Q03403 129 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 SLC10A6Q3KNW5 377 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 SEZ6Q53EL9 994 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 TJAP1Q5JTD0 557 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 GLRA4Q5JXX5 417 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 EP400NLQ6ZTU2 488 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 SYCP3Q8IZU3 236 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 FSIP1Q8NA03 581 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 DDX27Q96GQ7 796 aaKnown RBP18.92■□□□□ 0.62
MDC1-206ENST00000489540 PAGE5Q96GU1 130 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 TSPAN18Q96SJ8 248 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 VN1R3Q9BXE9 311 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 ADAM28Q9UKQ2 775 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.92■□□□□ 0.62
MDC1-206ENST00000489540 MYO7AQ13402 2215 aa18.92■□□□□ 0.62
MDC1-206ENST00000489540 GOLGA6L4A6NEF3 574 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 EFEMP2O95967 443 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 CA8P35219 290 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 CASP5P51878 434 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 LEXMQ3ZCV2 418 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 DCLRE1AQ6PJP8 1040 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 HERC2P3Q9BVR0 1158 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 RPF1Q9H9Y2 349 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 MRPL17Q9NRX2 175 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 KIAA1671Q9BY89 1806 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 FAM189A1O60320 539 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 POU5F1Q01860 360 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 KCNA1Q09470 495 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 CUL4BQ13620 913 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 PUS10Q3MIT2 529 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 FAM26FQ5R3K3 315 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 KIAA1841Q6NSI8 718 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 FUT10Q6P4F1 479 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 CD302Q8IX05 232 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 RNF168Q8IYW5 571 aaPredicted RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 POMGNT1Q8WZA1 660 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 PAAF1Q9BRP4 392 aa18.91■□□□□ 0.62
MDC1-206ENST00000489540 AGO2Q9UKV8 859 aaKnown RBP18.91■□□□□ 0.62
MDC1-206ENST00000489540 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.62
MDC1-206ENST00000489540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 TTC26A0AVF1 554 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 EIF3DO15371 548 aaKnown RBP eCLIP18.9■□□□□ 0.62
MDC1-206ENST00000489540 MEFVO15553 781 aaPredicted RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 PRPF6O94906 941 aaKnown RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 URODP06132 367 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 ADRB2P07550 413 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 SRGAP2BP0DMP2 458 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 CXCL8P10145 99 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 RPL9P32969 192 aaKnown RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 LTBRP36941 435 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 NDUFV1P49821 464 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 PPP2R3AQ06190 1150 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 EHHADHQ08426 723 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 ELAVL2Q12926 359 aaKnown RBP18.9■□□□□ 0.62
MDC1-206ENST00000489540 PTPN14Q15678 1187 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 USP41Q3LFD5 358 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 TAS1R1Q7RTX1 841 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 GPR65Q8IYL9 337 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
MDC1-206ENST00000489540 RABGGTAQ92696 567 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms