RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SPATA6Q9NWH7 488 aaPredicted RBP11.97□□□□□ -0.49
PTP4A2-206ENST00000489313 MTF2Q9Y483 593 aaPredicted RBP11.97□□□□□ -0.49
PTP4A2-206ENST00000489313 ZFP37Q9Y6Q3 630 aaPredicted RBP11.97□□□□□ -0.49
PTP4A2-206ENST00000489313 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
PTP4A2-206ENST00000489313 TRIP11Q15643 1979 aa11.97□□□□□ -0.49
PTP4A2-206ENST00000489313 A0A1B0GUA9 196 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 DGAT1O75907 488 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 CD72P21854 359 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 SCRN1Q12765 414 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 TUSC3Q13454 348 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 UBXN2BQ14CS0 331 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 MLF2Q15773 248 aaPredicted RBP11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 PPM1LQ5SGD2 360 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 MAEAQ7L5Y9 396 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 SLFN12Q8IYM2 578 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 PIGOQ8TEQ8 1089 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 CCDC43Q96MW1 224 aaKnown RBP11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 NAP1L4Q99733 375 aaKnown RBP11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 HSD17B14Q9BPX1 270 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 KXD1Q9BQD3 176 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 NFKBIZQ9BYH8 718 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 GPRC5CQ9NQ84 441 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 ANKEF1Q9NU02 776 aa11.96□□□□□ -0.49
PTP4A2-206ENST00000489313 ZMYM2Q9UBW7 1377 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 LRRIQ4A6NIV6 560 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 TTLL13PA6NNM8 815 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 PTGESO14684 152 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 LAMTOR5O43504 91 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 KINO60870 393 aaKnown RBP11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 LYPLA2O95372 231 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 RARRES1P49788 294 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 NR5A1Q13285 461 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 SLC44A4Q53GD3 710 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 MTSS1LQ765P7 747 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 SLC7A14Q8TBB6 771 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 PHF12Q96QT6 1004 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 BCO2Q9BYV7 579 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 HCFC1R1Q9NWW0 138 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 SNTG2Q9NY99 539 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 DLL3Q9NYJ7 618 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 PCDHA12Q9UN75 941 aa11.96□□□□□ -0.5
PTP4A2-206ENST00000489313 F5P12259 2224 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 STK36Q9NRP7 1315 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 FAM170BA6NMN3 283 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 CDKL5O76039 1030 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 XBP1P17861 261 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 CSTF1Q05048 431 aaKnown RBP11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 RSPO4Q2I0M5 234 aaPredicted RBP11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 AXDND1Q5T1B0 1012 aaPredicted RBP11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 ING5Q8WYH8 240 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 TM6SF1Q9BZW5 370 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 PDRG1Q9NUG6 133 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
PTP4A2-206ENST00000489313 MAP1BP46821 2468 aaKnown RBP11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 XYLBO75191 536 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 RECQL4O94761 1208 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 THP07101 528 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 HOXA9P31269 272 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 PRKCQQ04759 706 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 NAB2Q15742 525 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 CALCRLQ16602 461 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 TMEM132AQ24JP5 1023 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 NOSTRINQ8IVI9 506 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 NPAS3Q8IXF0 933 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 PDZD7Q9H5P4 517 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 TTC12Q9H892 705 aaPredicted RBP11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 LTB4R2Q9NPC1 389 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 PRMT7Q9NVM4 692 aaPredicted RBP11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 FRYQ5TBA9 3013 aa11.94□□□□□ -0.5
PTP4A2-206ENST00000489313 CEP295Q9C0D2 2601 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 WNT7AO00755 349 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 EDN1P05305 212 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 OR1D2P34982 312 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 KRT2P35908 639 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 TXKP42681 527 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 ZNF528Q3MIS6 628 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 RSPO2Q6UXX9 243 aaPredicted RBP11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 TPRG1Q6ZUI0 275 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 TNFRSF25Q93038 417 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 FZD8Q9H461 694 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 DNMT3BQ9UBC3 853 aaKnown RBP11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 FBXO4Q9UKT5 387 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 TPCN1Q9ULQ1 816 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 ZFHX4Q86UP3 3567 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 USP24Q9UPU5 2620 aa11.93□□□□□ -0.5
PTP4A2-206ENST00000489313 N4BP3O15049 544 aa11.92□□□□□ -0.5
PTP4A2-206ENST00000489313 SPTLC1O15269 473 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms