RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RNF135Q8IUD6 432 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 RPGRIP1Q96KN7 1286 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 FBXL18Q96ME1 805 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 TCHPQ9BT92 498 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 MORC2Q9Y6X9 1032 aaPredicted RBP27.39■■□□□ 1.98
HMGN1-217ENST00000489072 FAM86C2PA6NEL3 165 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 DCXO43602 365 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 WEE2P0C1S8 567 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 HARSP12081 509 aaKnown RBP27.38■■□□□ 1.97
HMGN1-217ENST00000489072 IGFBP6P24592 240 aaPredicted RBP27.38■■□□□ 1.97
HMGN1-217ENST00000489072 DDIT3P35638 169 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 USP41Q3LFD5 358 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 XKR4Q5GH76 650 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 KIAA1841Q6NSI8 718 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 HAUS6Q7Z4H7 955 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 KCNN1Q92952 543 aa27.38■■□□□ 1.97
HMGN1-217ENST00000489072 PDCD11Q14690 1871 aaKnown RBP27.38■■□□□ 1.97
HMGN1-217ENST00000489072 C2orf16Q68DN1 1984 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 SMIM28A0A1B0GU29 152 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 MEFVO15553 781 aaPredicted RBP27.37■■□□□ 1.97
HMGN1-217ENST00000489072 TOM1L1O75674 476 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 FAM13AO94988 1023 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 ALADP13716 330 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 CES5AQ6NT32 575 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 ZPBP2Q6X784 338 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 MYCT1Q8N699 235 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 SNX27Q96L92 541 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 HAPLN2Q9GZV7 340 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 POMKQ9H5K3 350 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 PARVGQ9HBI0 331 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 GOLGA2P5Q9HBQ8 144 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 ANKFY1Q9P2R3 1169 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 MUTYHQ9UIF7 546 aa27.37■■□□□ 1.97
HMGN1-217ENST00000489072 MTCL1Q9Y4B5 1905 aaKnown RBP27.37■■□□□ 1.97
HMGN1-217ENST00000489072 SF3B1O75533 1304 aaKnown RBP eCLIP27.37■■□□□ 1.974e-6■□□□□ 8.6
HMGN1-217ENST00000489072 KRT18P05783 430 aaKnown RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 ADH1AP07327 375 aa27.36■■□□□ 1.97
HMGN1-217ENST00000489072 NASPP49321 788 aaPredicted RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 YARSP54577 528 aaKnown RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 NOLC1Q14978 699 aaKnown RBP eCLIP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 RTP2Q5QGT7 225 aa27.36■■□□□ 1.97
HMGN1-217ENST00000489072 RIN2Q8WYP3 895 aaPredicted RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 ZMAT2Q96NC0 199 aaKnown RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 ACAP3Q96P50 834 aa27.36■■□□□ 1.97
HMGN1-217ENST00000489072 FIZ1Q96SL8 496 aa27.36■■□□□ 1.97
HMGN1-217ENST00000489072 LRFN3Q9BTN0 628 aa27.36■■□□□ 1.97
HMGN1-217ENST00000489072 TOPORSQ9NS56 1045 aaPredicted RBP27.36■■□□□ 1.97
HMGN1-217ENST00000489072 H0YCG3 227 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 GPR37L1O60883 481 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 SOX4Q06945 474 aaPredicted RBP27.35■■□□□ 1.97
HMGN1-217ENST00000489072 SEZ6Q53EL9 994 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 TMEM31Q5JXX7 168 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 TMC5Q6UXY8 1006 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 GPR65Q8IYL9 337 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 KRI1Q8N9T8 703 aaKnown RBP27.35■■□□□ 1.97
HMGN1-217ENST00000489072 STK17AQ9UEE5 414 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 CCDC39Q9UFE4 941 aa27.35■■□□□ 1.97
HMGN1-217ENST00000489072 DENND4AQ7Z401 1863 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 K7ENM7 598 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 RPL17P18621 184 aaKnown RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 SP100P23497 879 aaPredicted RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 MTHFRP42898 656 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 CLCNKBP51801 687 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 MCL1Q07820 350 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 HERC4Q5GLZ8 1057 aaPredicted RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 FOXD4L5Q5VV16 416 aaPredicted RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 PRSS55Q6UWB4 352 aaPredicted RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 CD300LGQ6UXG3 332 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 LINC00301Q8NCQ3 95 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 FOXD4L4Q8WXT5 416 aaPredicted RBP27.34■■□□□ 1.97
HMGN1-217ENST00000489072 NECTIN4Q96NY8 510 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 ZHX3Q9H4I2 956 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 SFXN1Q9H9B4 322 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 FNIP2Q9P278 1114 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 TBX20Q9UMR3 447 aa27.34■■□□□ 1.97
HMGN1-217ENST00000489072 TMEM189-UBE2V1I3L0A0 370 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 TRAK2O60296 914 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 TBCAO75347 108 aaKnown RBP27.33■■□□□ 1.97
HMGN1-217ENST00000489072 KCNE1P15382 129 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 FAM171A1Q5VUB5 890 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 RRAGBQ5VZM2 374 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 GLYCTKQ8IVS8 523 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 BICD1Q96G01 975 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 RIPOR3Q96MK2 946 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 TTPALQ9BTX7 342 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 MAN1C1Q9NR34 630 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.33■■□□□ 1.97
HMGN1-217ENST00000489072 CNTN3Q9P232 1028 aa27.33■■□□□ 1.97
HMGN1-217ENST00000489072 TFIP11Q9UBB9 837 aaKnown RBP27.33■■□□□ 1.97
HMGN1-217ENST00000489072 TECTAO75443 2155 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 A0A087X0B3 334 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 CLDN3O15551 220 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 GLUD1P00367 558 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 MYBP10242 640 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 NMT1P30419 496 aaKnown RBP27.32■■□□□ 1.96
HMGN1-217ENST00000489072 TXLNAP40222 546 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 STK38Q15208 465 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 UPP1Q16831 310 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 SLC10A6Q3KNW5 377 aa27.32■■□□□ 1.96
HMGN1-217ENST00000489072 DCLRE1AQ6PJP8 1040 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms