RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ZNF396Q96N95 335 aaPredicted RBP19.15■□□□□ 0.66
ATG3-205ENST00000488910 NECTIN4Q96NY8 510 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 ACAP3Q96P50 834 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 PPP1R10Q96QC0 940 aaKnown RBP19.15■□□□□ 0.66
ATG3-205ENST00000488910 CXCL16Q9H2A7 254 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.15■□□□□ 0.66
ATG3-205ENST00000488910 SF3B1O75533 1304 aaKnown RBP eCLIP19.15■□□□□ 0.66
ATG3-205ENST00000488910 CASTOR2A6NHX0 329 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 ABLIM1O14639 778 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 ADH1AP07327 375 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 NASPP49321 788 aaPredicted RBP19.14■□□□□ 0.65
ATG3-205ENST00000488910 ELAVL2Q12926 359 aaKnown RBP19.14■□□□□ 0.65
ATG3-205ENST00000488910 RRAGBQ5VZM2 374 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 RABGGTAQ92696 567 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 FBXL18Q96ME1 805 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 UROC1Q96N76 676 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 CLIC6Q96NY7 704 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 APOL5Q9BWW9 433 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 DPP7Q9UHL4 492 aa19.14■□□□□ 0.65
ATG3-205ENST00000488910 TRIP11Q15643 1979 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 SMIM28A0A1B0GU29 152 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 TEX28O15482 410 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 CLDN3O15551 220 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 DCXO43602 365 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 TRAK2O60296 914 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 TBCAO75347 108 aaKnown RBP19.13■□□□□ 0.65
ATG3-205ENST00000488910 MTHFRP42898 656 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 CREMQ03060 361 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 MCL1Q07820 350 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 NOLC1Q14978 699 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATG3-205ENST00000488910 CEP120Q8N960 986 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 ZBTB45Q96K62 511 aaPredicted RBP19.13■□□□□ 0.65
ATG3-205ENST00000488910 RIPOR3Q96MK2 946 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 SLC38A7Q9NVC3 462 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 FNIP2Q9P278 1114 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 TBX20Q9UMR3 447 aa19.13■□□□□ 0.65
ATG3-205ENST00000488910 TMEM189-UBE2V1I3L0A0 370 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 GPR37L1O60883 481 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 KCNE1P15382 129 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 OSTNP61366 133 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 STK38Q15208 465 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 ATAT1Q5SQI0 421 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 RARS2Q5T160 578 aaKnown RBP19.12■□□□□ 0.65
ATG3-205ENST00000488910 ELMSAN1Q6PJG2 1045 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 DCLRE1AQ6PJP8 1040 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 CCDC73Q6ZRK6 1079 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 SV2BQ7L1I2 683 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 RNF135Q8IUD6 432 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 LINC00301Q8NCQ3 95 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 BICD1Q96G01 975 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 DDX27Q96GQ7 796 aaKnown RBP19.12■□□□□ 0.65
ATG3-205ENST00000488910 SFXN1Q9H9B4 322 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 CACNG4Q9UBN1 327 aa19.12■□□□□ 0.65
ATG3-205ENST00000488910 KIF4AO95239 1232 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 KYAT1Q16773 422 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 GLRA4Q5JXX5 417 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 TMEM31Q5JXX7 168 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 PDXDC1Q6P996 788 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 C12orf76Q8N812 135 aaPredicted RBP19.11■□□□□ 0.65
ATG3-205ENST00000488910 HDAC7Q8WUI4 952 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 RIN2Q8WYP3 895 aaPredicted RBP19.11■□□□□ 0.65
ATG3-205ENST00000488910 RPGRIP1Q96KN7 1286 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 SNX27Q96L92 541 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 TTPALQ9BTX7 342 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 ZHX3Q9H4I2 956 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 CNTN3Q9P232 1028 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 ANKFY1Q9P2R3 1169 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 NR2E1Q9Y466 385 aa19.11■□□□□ 0.65
ATG3-205ENST00000488910 CITO14578 2027 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 K7ENM7 598 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 SPTLC2O15270 562 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 PPP6R2O75170 966 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 B3GAT3O94766 335 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 YEATS4O95619 227 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 GLUD1P00367 558 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 PIGRP01833 764 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 ZSCAN22P10073 491 aaPredicted RBP19.1■□□□□ 0.65
ATG3-205ENST00000488910 MATR3P43243 847 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATG3-205ENST00000488910 LIG4P49917 911 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 CLCNKBP51801 687 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 GTF2BQ00403 316 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 UPP1Q16831 310 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 HERC4Q5GLZ8 1057 aaPredicted RBP19.1■□□□□ 0.65
ATG3-205ENST00000488910 FAM171A1Q5VUB5 890 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 CYP26C1Q6V0L0 522 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 HASPINQ8TF76 798 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 B3GALT6Q96L58 329 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 ST6GALNAC4Q9H4F1 302 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 PLEKHA5Q9HAU0 1116 aa19.1■□□□□ 0.65
ATG3-205ENST00000488910 TFIP11Q9UBB9 837 aaKnown RBP19.1■□□□□ 0.65
ATG3-205ENST00000488910 SPDYE4A6NLX3 237 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 TRAPPC3O43617 180 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 CLTAP09496 248 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
ATG3-205ENST00000488910 RPL9P32969 192 aaKnown RBP19.09■□□□□ 0.65
ATG3-205ENST00000488910 SLC10A6Q3KNW5 377 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 ATL3Q6DD88 541 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 C15orf39Q6ZRI6 1047 aa19.09■□□□□ 0.65
ATG3-205ENST00000488910 GPR149Q86SP6 731 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms