RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 KMT5AQ9NQR1 393 aa14.36□□□□□ -0.11
CHD1L-208ENST00000488864 SIK3Q9Y2K2 1263 aa14.36□□□□□ -0.11
CHD1L-208ENST00000488864 LCA5LO95447 670 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 SRGAP2CP0DJJ0 459 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 TNFRSF8P28908 595 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 ARL2P36404 184 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 KLHDC7AQ5VTJ3 777 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 OTUD6BQ8N6M0 293 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 IFT74Q96LB3 600 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 SUCLA2Q9P2R7 463 aaPredicted RBP14.35□□□□□ -0.11
CHD1L-208ENST00000488864 USP20Q9Y2K6 914 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 IGKV6-21A0A0C4DH24 114 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 HAS3O00219 553 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 MEFVO15553 781 aaPredicted RBP14.35□□□□□ -0.11
CHD1L-208ENST00000488864 AKR1B10O60218 316 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 LSP1P33241 339 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 PAFAH1B1P43034 410 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 SMTNP53814 917 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 TRADDQ15628 312 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 MTHFD1LQ6UB35 978 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 FAM114A1Q8IWE2 563 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 KLHDC9Q8NEP7 349 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 IFT81Q8WYA0 676 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 VTI1AQ96AJ9 217 aa14.35□□□□□ -0.11
CHD1L-208ENST00000488864 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHD1L-208ENST00000488864 LRRC53A6NM62 1247 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 VTNP04004 478 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 MAGEA1P43355 309 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 GUCY2FP51841 1108 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 SEC24CP53992 1094 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 NAP1L1P55209 391 aaKnown RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 CAPSQ13938 189 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 KDM7AQ6ZMT4 941 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 RNF180Q86T96 592 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 TMEM161BQ8NDZ6 487 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 PSPC1Q8WXF1 523 aaKnown RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 NLRP4Q96MN2 994 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 ALS2CR12Q96Q35 445 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 FAM49AQ9H0Q0 323 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 GDF3Q9NR23 364 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 AKT3Q9Y243 479 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 DENND3A2RUS2 1198 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 TISP43B9A030 160 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 TREHO43280 583 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 DNA2P51530 1060 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 NAA35Q5VZE5 725 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 CCSAPQ6IQ19 270 aaPredicted RBP14.34□□□□□ -0.11
CHD1L-208ENST00000488864 RRAGAQ7L523 313 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 RNF208Q9H0X6 261 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
CHD1L-208ENST00000488864 TRIP12Q14669 1992 aaPredicted RBP14.33□□□□□ -0.11
CHD1L-208ENST00000488864 NRCAMQ92823 1304 aa14.33□□□□□ -0.11
CHD1L-208ENST00000488864 CLIC2O15247 247 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 CSDE1O75534 798 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 PPP1R37O75864 691 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 FSBPO95073 299 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 NCKAP1LP55160 1127 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 PPARDQ03181 441 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 IER5Q5VY09 327 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 EPN3Q9H201 632 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 C17orf75Q9HAS0 396 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 GINS2Q9Y248 185 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 ZMYM2Q9UBW7 1377 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 ATXN2Q99700 1313 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 PJA2O43164 708 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 MSCO60682 206 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 KIAA0754O94854 1291 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 HEXIM1O94992 359 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 JPH2Q9BR39 696 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 NTPCRQ9BSD7 190 aaKnown RBP14.33□□□□□ -0.12
CHD1L-208ENST00000488864 STRA6Q9BX79 667 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 NDST4Q9H3R1 872 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 PPME1Q9Y570 386 aa14.33□□□□□ -0.12
CHD1L-208ENST00000488864 COL1A2P08123 1366 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms