RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	CDK5RAP3	Q96JB5	506 aa		18.76	■□□□□ 0.59
SUN1-233	ENST00000488628	NT5C3A	Q9H0P0	336 aa		18.76	■□□□□ 0.59
SUN1-233	ENST00000488628	GOLGA2P5	Q9HBQ8	144 aa		18.76	■□□□□ 0.59
SUN1-233	ENST00000488628	LIMD1	Q9UGP4	676 aa		18.76	■□□□□ 0.59
SUN1-233	ENST00000488628	RBM19	Q9Y4C8	960 aa	Known RBP	18.76	■□□□□ 0.59
SUN1-233	ENST00000488628	CCDC195	A0A1B0GUA6	201 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	TGM5	O43548	720 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	PLS3	P13797	630 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	GRM5	P41594	1212 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	SOX4	Q06945	474 aa	Predicted RBP	18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	FAM171A1	Q5VUB5	890 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	LILRA6	Q6PI73	481 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	ALKAL1	Q6UXT8	129 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	BRAP	Q7Z569	592 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	KREMEN2	Q8NCW0	462 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	TMEM161B	Q8NDZ6	487 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	SPIRE2	Q8WWL2	714 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	PBXIP1	Q96AQ6	731 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	FAM122A	Q96E09	287 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	ASIC4	Q96FT7	647 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	TIPIN	Q9BVW5	301 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	C17orf75	Q9HAS0	396 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	BLOC1S4	Q9NUP1	217 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	FNIP2	Q9P278	1114 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	KMT2E	Q8IZD2	1858 aa		18.75	■□□□□ 0.59
SUN1-233	ENST00000488628	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	7e-6	■■■■■ 28.7
SUN1-233	ENST00000488628	SMIM28	A0A1B0GU29	152 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	ADAM12	O43184	909 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	MAPT	P10636	758 aa	Known RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	CLCNKB	P51801	687 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	SIGLEC14	Q08ET2	396 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	DHX8	Q14562	1220 aa	Known RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	KARS	Q15046	597 aa	Known RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	SEZ6	Q53EL9	994 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	XKR4	Q5GH76	650 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	FAM173B	Q6P4H8	233 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	BMP8A	Q7Z5Y6	402 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	CEP57	Q86XR8	500 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	GPR65	Q8IYL9	337 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	ZDHHC14	Q8IZN3	488 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	TDRD5	Q8NAT2	981 aa	Known RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	C3orf58	Q8NDZ4	430 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	CMAS	Q8NFW8	434 aa	Predicted RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	LNX1	Q8TBB1	728 aa	Predicted RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	ZNF707	Q96C28	371 aa	Predicted RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	ZMAT2	Q96NC0	199 aa	Known RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	CLSTN3	Q9BQT9	956 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	TTPAL	Q9BTX7	342 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	ARIH1	Q9Y4X5	557 aa	Predicted RBP	18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	CLIC4	Q9Y696	253 aa		18.74	■□□□□ 0.59
SUN1-233	ENST00000488628	N4BP1	O75113	896 aa	Known RBP	18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	BRD1	O95696	1058 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	HARS	P12081	509 aa	Known RBP	18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	UBA7	P41226	1012 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	MPZL3	Q6UWV2	235 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	C15orf39	Q6ZRI6	1047 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	USP49	Q70CQ1	688 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	TMEM130	Q8N3G9	435 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	KCTD17	Q8N5Z5	321 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	AK8	Q96MA6	479 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	MFSD14A	Q96MC6	490 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	TCHP	Q9BT92	498 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	CCDC94	Q9BW85	323 aa	Predicted RBP	18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	HAPLN2	Q9GZV7	340 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	FOXD4L1	Q9NU39	408 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628	UST	Q9Y2C2	406 aa		18.73	■□□□□ 0.59
SUN1-233	ENST00000488628		I3L4J1	428 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	PDGFB	P01127	241 aa	Predicted RBP	18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	MCF2	P10911	925 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	PLCG1	P19174	1290 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	SYT1	P21579	422 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	REST	Q13127	1097 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	MCM6	Q14566	821 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	PTPA	Q15257	358 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	PSMD5	Q16401	504 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	UPP1	Q16831	310 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	SPECC1	Q5M775	1068 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	DCLRE1A	Q6PJP8	1040 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	CCDC149	Q6ZUS6	474 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	GPBP1	Q86WP2	473 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	PIK3R5	Q8WYR1	880 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	CALML4	Q96GE6	196 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	SNX27	Q96L92	541 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	REEP2	Q9BRK0	252 aa		18.72	■□□□□ 0.59
SUN1-233	ENST00000488628	B3GAT3	O94766	335 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	FGFR3	P22607	806 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	MARCKS	P29966	332 aa	Predicted RBP	18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	LONP1	P36776	959 aa	Known RBP	18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	BRCC3	P46736	316 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	SMTN	P53814	917 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	YARS	P54577	528 aa	Known RBP	18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	NCKAP1L	P55160	1127 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	STRN3	Q13033	797 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	IER5L	Q5T953	404 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	HDAC7	Q8WUI4	952 aa		18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	SMG7	Q92540	1137 aa	Known RBP	18.71	■□□□□ 0.59
SUN1-233	ENST00000488628	C18orf25	Q96B23	403 aa	Predicted RBP	18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms