RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
TTC3-221ENST00000488522 SHDQ96IW2 340 aa13.57□□□□□ -0.24
TTC3-221ENST00000488522 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
TTC3-221ENST00000488522 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
TTC3-221ENST00000488522 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
TTC3-221ENST00000488522 R4GN57 208 aa13.57□□□□□ -0.24
TTC3-221ENST00000488522 STK25O00506 426 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 C8AP07357 584 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 MYBP10242 640 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
TTC3-221ENST00000488522 MAGEA9P43362 315 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 RAB33AQ14088 237 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 PSMD5Q16401 504 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 CALCRLQ16602 461 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 PARM1Q6UWI2 310 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
TTC3-221ENST00000488522 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
TTC3-221ENST00000488522 SUMF1Q8NBK3 374 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 RUBCNQ92622 972 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 FGF13Q92913 245 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
TTC3-221ENST00000488522 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 ORC3Q9UBD5 711 aaPredicted RBP13.56□□□□□ -0.24
TTC3-221ENST00000488522 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 FBXO4Q9UKT5 387 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 KCNH3Q9ULD8 1083 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
TTC3-221ENST00000488522 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 POTEMA6NI47 508 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 N4BP3O15049 544 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 NEMFO60524 1076 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 USO1O60763 962 aaKnown RBP13.55□□□□□ -0.24
TTC3-221ENST00000488522 XYLBO75191 536 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 MCM2P49736 904 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 GPC5P78333 572 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 MLF2Q15773 248 aaPredicted RBP13.55□□□□□ -0.24
TTC3-221ENST00000488522 PPM1LQ5SGD2 360 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 FAM171A1Q5VUB5 890 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
TTC3-221ENST00000488522 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 PIGOQ8TEQ8 1089 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 NELL1Q92832 810 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 TUFT1Q9NNX1 390 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
TTC3-221ENST00000488522 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
TTC3-221ENST00000488522 TPRP12270 2363 aaKnown RBP13.54□□□□□ -0.24
TTC3-221ENST00000488522 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 CASTOR2A6NHX0 329 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 WNT7AO00755 349 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 SPTLC1O15269 473 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 ADAM12O43184 909 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 RECQL4O94761 1208 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 THP07101 528 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 FGFR3P22607 806 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 NTHL1P78549 312 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 PFKPQ01813 784 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.24
TTC3-221ENST00000488522 ME3Q16798 604 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
TTC3-221ENST00000488522 CCDC43Q96MW1 224 aaKnown RBP13.54□□□□□ -0.24
TTC3-221ENST00000488522 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 F5P12259 2224 aa13.54□□□□□ -0.24
TTC3-221ENST00000488522 ACKR2O00590 384 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
TTC3-221ENST00000488522 LARGE1O95461 756 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 NAMPTP43490 491 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 SLC44A4Q53GD3 710 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 ITFG1Q8TB96 612 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 CLDN23Q96B33 292 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 PPP1R10Q96QC0 940 aaKnown RBP13.53□□□□□ -0.24
TTC3-221ENST00000488522 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
TTC3-221ENST00000488522 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 SH2B1Q9NRF2 756 aaPredicted RBP13.53□□□□□ -0.24
TTC3-221ENST00000488522 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 PCDHGA2Q9Y5H1 932 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 COL4A2P08572 1712 aa13.53□□□□□ -0.24
TTC3-221ENST00000488522 TRIP11Q15643 1979 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms