RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 PLA2G4BP0C869 781 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 NAB2Q15742 525 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 SEZ6Q53EL9 994 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 SMG7Q92540 1137 aaKnown RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 ACSF2Q96CM8 615 aaPredicted RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 DRC1Q96MC2 740 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 MRPL4Q9BYD3 311 aaKnown RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 CDT1Q9H211 546 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 PIDD1Q9HB75 910 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 SORCS3Q9UPU3 1222 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 TNFSF13BQ9Y275 285 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 ARIH1Q9Y4X5 557 aaPredicted RBP12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 ZMYM2Q9UBW7 1377 aa12.41□□□□□ -0.42
NIPAL3-207ENST00000488155 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 I3L4J1 428 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ADAM12O43184 909 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 B3GAT3O94766 335 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 BRCC3P46736 316 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 CLCNKBP51801 687 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 GRIN1Q05586 938 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 MTMR3Q13615 1198 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 PSMD5Q16401 504 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 HYIQ5T013 277 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 APBB1IPQ7Z5R6 666 aaPredicted RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ZDHHC14Q8IZN3 488 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 SYT2Q8N9I0 419 aaPredicted RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ST13P5Q8NFI4 369 aaPredicted RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 PPP1R10Q96QC0 940 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 CLSTN3Q9BQT9 956 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 CCDC94Q9BW85 323 aaPredicted RBP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
NIPAL3-207ENST00000488155 ZNF638Q14966 1978 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 PIEZO1Q92508 2521 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 N4BP1O75113 896 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 GUCY2CP25092 1073 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 UBA7P41226 1012 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 GRM5P41594 1212 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 MATR3P43243 847 aaKnown RBP eCLIP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 SLC12A3P55017 1021 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 LILRA6Q6PI73 481 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ELMSAN1Q6PJG2 1045 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 C15orf39Q6ZRI6 1047 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 OTOP3Q7RTS5 596 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 PRSS33Q8NF86 280 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 LNX1Q8TBB1 728 aaPredicted RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 LRRC15Q8TF66 581 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ZNF707Q96C28 371 aaPredicted RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ZMAT2Q96NC0 199 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 PTPRHQ9HD43 1115 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 CACNA1IQ9P0X4 2223 aa12.39□□□□□ -0.43
NIPAL3-207ENST00000488155 ABLIM1O14639 778 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 PLS3P13797 630 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 OR1D2P34982 312 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 SMTNP53814 917 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 NHLH1Q02575 133 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 STRN3Q13033 797 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 MCM6Q14566 821 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 TMEM119Q4V9L6 283 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 ARSHQ5FYA8 562 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 SPECC1Q5M775 1068 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 MPZL3Q6UWV2 235 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 CD300LGQ6UXG3 332 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 GET4Q7L5D6 327 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 GPBP1Q86WP2 473 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 C3orf58Q8NDZ4 430 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 TMEM161BQ8NDZ6 487 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 CMASQ8NFW8 434 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 C18orf25Q96B23 403 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-207ENST00000488155 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms