RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 POLG2Q9UHN1 485 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 TUBE1Q9UJT0 475 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 NAGPAQ9UK23 515 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 NR2E1Q9Y466 385 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 CDY2AQ9Y6F7 541 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 LOXHD1Q8IVV2 1947 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 KIAA1671Q9BY89 1806 aa7.64□□□□□ -1.19
HDAC3-209ENST00000486618 GVINP1Q7Z2Y8 2422 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PNMA6FA0A0J9YX94 578 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 DYTNA2CJ06 578 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 MBLAC1A4D2B0 266 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PRR23AA6NEV1 266 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PER2O15055 1255 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PPP1R11O60927 126 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 LILRB5O75023 590 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 MTA2O94776 668 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 HOXB8P17481 243 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 CD52P31358 61 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 TCF7P36402 384 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 ID4P47928 161 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PDE1AP54750 535 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PAK2Q13177 524 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 DUSP6Q16828 381 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 IMMTQ16891 758 aaKnown RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 MCTP2Q6DN12 878 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM184AQ6ZMB5 413 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 RUFY4Q6ZNE9 571 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 ASCL5Q7RTU5 278 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 KRT25Q7Z3Z0 450 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 RTN4RL1Q86UN2 441 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 WDR75Q8IWA0 830 aaKnown RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 SEPT1Q8WYJ6 367 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 GOLGA1Q92805 767 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 GLG1Q92896 1179 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 CUL5Q93034 780 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 NKD2Q969F2 451 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 SLC39A13Q96H72 371 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 CDHR1Q96JP9 859 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 FAM210AQ96ND0 272 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PIGSQ96S52 555 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 IER2Q9BTL4 223 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 SMARCAD1Q9H4L7 1026 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 AGO3Q9H9G7 860 aaKnown RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 JPH1Q9HDC5 661 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 ZFATQ9P243 1243 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 SORCS3Q9UPU3 1222 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 USP20Q9Y2K6 914 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 SUPT16HQ9Y5B9 1047 aaKnown RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PCDHB7Q9Y5E2 793 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 PLXNA4Q9HCM2 1894 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 CFAP54Q96N23 3096 aa7.63□□□□□ -1.19
HDAC3-209ENST00000486618 EP300Q09472 2414 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-209ENST00000486618 FRMPD4Q14CM0 1322 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 FGF18O76093 207 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 TECP42680 631 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SATB1Q01826 763 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 MTMR3Q13615 1198 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SYCP2LQ5T4T6 812 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 C1QTNF12Q5T7M4 302 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 PCNX4Q63HM2 1172 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 CES5AQ6NT32 575 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 ANKRD54Q6NXT1 300 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 CCDC73Q6ZRK6 1079 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 TREML1Q86YW5 311 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 THNSL1Q8IYQ7 743 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 KREMEN2Q8NCW0 462 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SMARCC2Q8TAQ2 1214 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 RASGRP4Q8TDF6 673 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 NUDT8Q8WV74 236 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 LINC01599Q8WXQ3 324 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 RILPL2Q969X0 211 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 NECTIN4Q96NY8 510 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SAP130Q9H0E3 1048 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 FAM49AQ9H0Q0 323 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-209ENST00000486618 S1PR5Q9H228 398 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 SLKQ9H2G2 1235 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-209ENST00000486618 RIOX1Q9H6W3 641 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM51Q9NW97 253 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 TMEM260Q9NX78 707 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 MAD2L2Q9UI95 211 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 PADI3Q9ULW8 664 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 TRPV2Q9Y5S1 764 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 CACNA1BQ00975 2339 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 LAMA4Q16363 1823 aa7.62□□□□□ -1.19
HDAC3-209ENST00000486618 IGSF9BQ9UPX0 1349 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 ERICH2A1L162 156 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 MAP3K6O95382 1288 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 PDGFBP01127 241 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 INSRRP14616 1297 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 SDSP20132 328 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 TARSP26639 723 aaKnown RBP7.61□□□□□ -1.19
HDAC3-209ENST00000486618 MARK3P27448 753 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 SERPINB4P48594 390 aa7.61□□□□□ -1.19
HDAC3-209ENST00000486618 CLCN5P51795 746 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms