RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PTENP60484 403 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 MBTD1Q05BQ5 628 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 CALCRLQ16602 461 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 KRBA2Q6ZNG9 492 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 SPATA31D4Q6ZUB0 917 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 COLGALT2Q8IYK4 626 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 CEP57L1Q8IYX8 460 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 GSTCDQ8NEC7 633 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 PAAF1Q9BRP4 392 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 PCDHA12Q9UN75 941 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 N4BP1O75113 896 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 NPTXRO95502 500 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 EFEMP2O95967 443 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 TPM3P06753 285 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 SRGAP2BP0DMP2 458 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 SKIP12755 728 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 ITGA4P13612 1032 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 KLRC2P26717 231 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 OR1G1P47890 313 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 RARRES1P49788 294 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 RAB27AP51159 221 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CLCN4P51793 760 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 ITIH3Q06033 890 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 ANO6Q4KMQ2 910 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CES5AQ6NT32 575 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 OTUD6AQ7L8S5 288 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CABP7Q86V35 215 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 GLYCTKQ8IVS8 523 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 TMEM105Q8N8V8 129 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 TRIML1Q8N9V2 468 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 URGCPQ8TCY9 931 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 BSNDQ8WZ55 320 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 CCDC39Q9UFE4 941 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 DBR1Q9UK59 544 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 IRAK3Q9Y616 596 aa10.34□□□□□ -0.75
TMEM39A-208ENST00000486159 H0Y858 1186 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 GOLGA6L19H0YKK7 550 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 TEX28O15482 410 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 NEMFO60524 1076 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 RFPL2O75678 378 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 ERLIN2O94905 339 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 MCM7P33993 719 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 TXLNAP40222 546 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 MTHFRP42898 656 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 NLRP12P59046 1061 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 DSC1Q08554 894 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 PTGDRQ13258 359 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 ZNF174Q15697 407 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 ECM1Q16610 540 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 ATAT1Q5SQI0 421 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 KIAA1841Q6NSI8 718 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 GPR149Q86SP6 731 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 CATSPER3Q86XQ3 398 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 SLFN12Q8IYM2 578 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 RNF168Q8IYW5 571 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 TCP11Q8WWU5 503 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 AK8Q96MA6 479 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 CSRNP2Q9H175 543 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 POLR3FQ9H1D9 316 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 CBX8Q9HC52 389 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 SPTBN4Q9H254 2564 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
TMEM39A-208ENST00000486159 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 ASAP2O43150 1006 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 PI15O43692 258 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 SMC2O95347 1197 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 LYPLA2O95372 231 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 SOD2P04179 222 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 TPM4P67936 248 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 NT5DC1Q5TFE4 455 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 PALB2Q86YC2 1186 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 HASPINQ8TF76 798 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 RPS6KC1Q96S38 1066 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 TMEM175Q9BSA9 504 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 HERC2P3Q9BVR0 1158 aa10.32□□□□□ -0.76
TMEM39A-208ENST00000486159 KCNH6Q9H252 994 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms