RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	DCLRE1A	Q6PJP8	1040 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	COLGALT2	Q8IYK4	626 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	PJA1	Q8NG27	643 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	STAM	Q92783	540 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	NXF3	Q9H4D5	531 aa	Known RBP	11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	UBN1	Q9NPG3	1134 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	MRPL17	Q9NRX2	175 aa	Known RBP	11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	MARCH5	Q9NX47	278 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	KLK14	Q9P0G3	267 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	EPS15L1	Q9UBC2	864 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	PARP2	Q9UGN5	583 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	USP20	Q9Y2K6	914 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	CFAP47	Q6ZTR5	3102 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	CHD6	Q8TD26	2715 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	DCDC2B	A2VCK2	349 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	CARNS1	A5YM72	827 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	LILRB3	O75022	631 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	SPATA31D3	P0C874	917 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	XRCC6	P12956	609 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	NBR1	Q14596	966 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	SPATA31D4	Q6ZUB0	917 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	GET4	Q7L5D6	327 aa	Predicted RBP	11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	FAM184A	Q8NB25	1140 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	SMG7	Q92540	1137 aa	Known RBP	11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	CCDC51	Q96ER9	411 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	B3GALT6	Q96L58	329 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	NACC1	Q96RE7	527 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	KRTAP3-3	Q9BYR6	98 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	KRTAP3-2	Q9BYR7	98 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	CACNG4	Q9UBN1	327 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	GIT1	Q9Y2X7	761 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	STK24	Q9Y6E0	443 aa		11.7	□□□□□ -0.54
HMGN1-215	ENST00000485550	NOTCH4	Q99466	2003 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550		A0A1B0GUA9	196 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	SOD2	P04179	222 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	UROD	P06132	367 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	OR52Z1	P0C646	297 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	TMEM132A	Q24JP5	1023 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	TTC38	Q5R3I4	469 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	KIAA0319	Q5VV43	1072 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	SLC27A1	Q6PCB7	646 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	PADI6	Q6TGC4	694 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	GLYCTK	Q8IVS8	523 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	HACE1	Q8IYU2	909 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	CMAS	Q8NFW8	434 aa	Predicted RBP	11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	FBXO18	Q8NFZ0	1043 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	ERMN	Q8TAM6	284 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	BSND	Q8WZ55	320 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	NXPE3	Q969Y0	559 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	LLPH	Q9BRT6	129 aa	Known RBP	11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	COLEC11	Q9BWP8	271 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	NFKBIZ	Q9BYH8	718 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	TUFT1	Q9NNX1	390 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	CDV3	Q9UKY7	258 aa	Known RBP	11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	NUMBL	Q9Y6R0	609 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	SDK1	Q7Z5N4	2213 aa		11.69	□□□□□ -0.54
HMGN1-215	ENST00000485550	ARHGEF35	A5YM69	484 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	TEX28	O15482	410 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	LAMTOR5	O43504	91 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	NR1I2	O75469	434 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	GLUD1	P00367	558 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	LAMP2	P13473	410 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	RBM25	P49756	843 aa	Known RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	CSTF1	Q05048	431 aa	Known RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	DSC1	Q08554	894 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	SNW1	Q13573	536 aa	Known RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	HTR4	Q13639	388 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	ECM1	Q16610	540 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	TMEM92	Q6UXU6	159 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	PALB2	Q86YC2	1186 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	NOSTRIN	Q8IVI9	506 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	ZBTB8OS	Q8IWT0	167 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	GSTCD	Q8NEC7	633 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	MCPH1	Q8NEM0	835 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	ZNF707	Q96C28	371 aa	Predicted RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	RPS6KC1	Q96S38	1066 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	KIF2C	Q99661	725 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	PAAF1	Q9BRP4	392 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	RPP25	Q9BUL9	199 aa	Known RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	HERC2P3	Q9BVR0	1158 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	GPR62	Q9BZJ7	368 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	FOXP1	Q9H334	677 aa	Predicted RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	PIDD1	Q9HB75	910 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	USP18	Q9UMW8	372 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	MTF2	Q9Y483	593 aa	Predicted RBP	11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	F5	P12259	2224 aa		11.68	□□□□□ -0.54
HMGN1-215	ENST00000485550	SPTLC1	O15269	473 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	ADH1A	P07327	375 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	RPL17	P18621	184 aa	Known RBP	11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	CYP11B2	P19099	503 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	SDHB	P21912	280 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	RPA1	P27694	616 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	CCT6A	P40227	531 aa	Known RBP	11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	GLUD2	P49448	558 aa		11.67	□□□□□ -0.54
HMGN1-215	ENST00000485550	STARD6	P59095	220 aa		11.67	□□□□□ -0.54

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