RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 PSMD6Q15008 389 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 TCP11X2Q5H9J9 407 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 ALKAL1Q6UXT8 129 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 CRIPAKQ8N1N5 446 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 PLEKHO2Q8TD55 490 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 TMC2Q8TDI7 906 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 FAM212AQ96EL1 285 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 SNX27Q96L92 541 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 PLEKHA5Q9HAU0 1116 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 KLK14Q9P0G3 267 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 LRFN2Q9ULH4 789 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 TULP1O00294 542 aaPredicted RBP19.08■□□□□ 0.64
CHMP3-207ENST00000485465 CAPN15O75808 1086 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 AMHP03971 560 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.64
CHMP3-207ENST00000485465 VAMP7P51809 220 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 WNT7BP56706 349 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 PPP2R3AQ06190 1150 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 SPAG1Q07617 926 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 BFSP1Q12934 665 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 SURF1Q15526 300 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 XKR4Q5GH76 650 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 NPAS4Q8IUM7 802 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 CD302Q8IX05 232 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 PARD3BQ8TEW8 1205 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 CCDC127Q96BQ5 260 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 ASB7Q9H672 318 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 RSAD1Q9HA92 442 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 PDE11AQ9HCR9 933 aa19.08■□□□□ 0.64
CHMP3-207ENST00000485465 ATP1A3P13637 1013 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 MTIF2P46199 727 aaKnown RBP19.07■□□□□ 0.64
CHMP3-207ENST00000485465 KCNJ6P48051 423 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 TRIM59Q8IWR1 403 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 FNBP1Q96RU3 617 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 CXCL16Q9H2A7 254 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 RNF19AQ9NV58 838 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 CNTN3Q9P232 1028 aa19.07■□□□□ 0.64
CHMP3-207ENST00000485465 ARL5CA6NH57 179 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 LRRIQ3A6PVS8 624 aaPredicted RBP19.06■□□□□ 0.64
CHMP3-207ENST00000485465 ZBBXA8MT70 800 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 OFD1O75665 1012 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 DLATP10515 647 aaKnown RBP19.06■□□□□ 0.64
CHMP3-207ENST00000485465 MLH1P40692 756 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 DLG4P78352 724 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 DEFB103AP81534 67 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 C1orf220Q5T0J3 134 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 USP37Q86T82 979 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 ANKRD20A12PQ8NF67 263 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 TOP1MTQ969P6 601 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 GAD1Q99259 594 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 POP1Q99575 1024 aaKnown RBP19.06■□□□□ 0.64
CHMP3-207ENST00000485465 CGRRF1Q99675 332 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 TUBGCP2Q9BSJ2 902 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 LIMA1Q9UHB6 759 aaKnown RBP19.06■□□□□ 0.64
CHMP3-207ENST00000485465 MICAL3Q7RTP6 2002 aa19.06■□□□□ 0.64
CHMP3-207ENST00000485465 H0YGN5 161 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 INPPL1O15357 1258 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 HOXA2O43364 376 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 TRIM49P0CI25 452 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 TRIM49CP0CI26 452 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 FGFR1P11362 822 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 KCNE1P15382 129 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 CLDN10P78369 228 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 KRT31Q15323 416 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 DCAF17Q5H9S7 520 aaPredicted RBP19.05■□□□□ 0.64
CHMP3-207ENST00000485465 CLLU1OSQ5K130 101 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 TCERG1LQ5VWI1 586 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 JADE1Q6IE81 842 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 GLB1LQ6UWU2 654 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 GSTCDQ8NEC7 633 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 SLC35C1Q96A29 364 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 ZFP42Q96MM3 310 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 ZMAT2Q96NC0 199 aaKnown RBP19.05■□□□□ 0.64
CHMP3-207ENST00000485465 TSPAN18Q96SJ8 248 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 CXXC1Q9P0U4 656 aaPredicted RBP19.05■□□□□ 0.64
CHMP3-207ENST00000485465 DERAQ9Y315 318 aa19.05■□□□□ 0.64
CHMP3-207ENST00000485465 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHMP3-207ENST00000485465 SMIM28A0A1B0GU29 152 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 LRRC10BA6NIK2 292 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 PTGESO14684 152 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 UPP2O95045 317 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 NFICP08651 508 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
CHMP3-207ENST00000485465 TNNI1P19237 187 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
CHMP3-207ENST00000485465 MAN2A1Q16706 1144 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 WDR49Q8IV35 697 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 EFCAB13Q8IY85 973 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 KIF12Q96FN5 646 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 RPS6KC1Q96S38 1066 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 MTIF3Q9H2K0 278 aaKnown RBP19.04■□□□□ 0.64
CHMP3-207ENST00000485465 MIOSQ9NXC5 875 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 TAB2Q9NYJ8 693 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 C2CD2Q9Y426 696 aa19.04■□□□□ 0.64
CHMP3-207ENST00000485465 PTPRJQ12913 1337 aa19.03■□□□□ 0.64
CHMP3-207ENST00000485465 STX10O60499 249 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms