RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PLEKHA4Q9H4M7 779 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 GOLGA2P5Q9HBQ8 144 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.84■□□□□ 0.77
ATG4B-221ENST00000483778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATG4B-221ENST00000483778 PDCD11Q14690 1871 aaKnown RBP19.84■□□□□ 0.77
ATG4B-221ENST00000483778 SF3B1O75533 1304 aaKnown RBP eCLIP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 MYH15Q9Y2K3 1946 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 CCDC169A6NNP5 214 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 K7ERI5 159 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 MEFVO15553 781 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 HIP1RO75146 1068 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 ZMYND10O75800 440 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 NTHL1P78549 312 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 SOX4Q06945 474 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 HAUS3Q68CZ6 603 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 CWF19L1Q69YN2 538 aaKnown RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 RINT1Q6NUQ1 792 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 RSPO2Q6UXX9 243 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 KIFAP3Q92845 792 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 PPP1R10Q96QC0 940 aaKnown RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 ACO2Q99798 780 aaKnown RBP19.83■□□□□ 0.77
ATG4B-221ENST00000483778 ADPGKQ9BRR6 497 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 RHOBTB2Q9BYZ6 727 aa19.83■□□□□ 0.77
ATG4B-221ENST00000483778 I3L4J1 428 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 GALR2O43603 387 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-221ENST00000483778 EFNA5P52803 228 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 OSTNP61366 133 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PSMD5Q16401 504 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 C1orf186Q6ZWK4 172 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 TMEM130Q8N3G9 435 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 SLC44A3Q8N4M1 653 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 C3orf58Q8NDZ4 430 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 FLCNQ8NFG4 579 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PIK3R5Q8WYR1 880 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 ATOH1Q92858 354 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-221ENST00000483778 ZBTB45Q96K62 511 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PNMA5Q96PV4 448 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PLIN2Q99541 437 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 TARS2Q9BW92 718 aaKnown RBP19.82■□□□□ 0.76
ATG4B-221ENST00000483778 CDT1Q9H211 546 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PIDD1Q9HB75 910 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 PTPRHQ9HD43 1115 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 EPS15L1Q9UBC2 864 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 DUSP12Q9UNI6 340 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 DNM3Q9UQ16 869 aa19.82■□□□□ 0.76
ATG4B-221ENST00000483778 C1RP00736 705 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 CLCNKBP51801 687 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 RAD51AP2Q09MP3 1159 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 MCTP1Q6DN14 999 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 ALKAL1Q6UXT8 129 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 CYP26C1Q6V0L0 522 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 ZMAT2Q96NC0 199 aaKnown RBP19.81■□□□□ 0.76
ATG4B-221ENST00000483778 RPP25Q9BUL9 199 aaKnown RBP19.81■□□□□ 0.76
ATG4B-221ENST00000483778 ZDHHC7Q9NXF8 308 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 FBXW11Q9UKB1 542 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 VPS13AQ96RL7 3174 aa19.81■□□□□ 0.76
ATG4B-221ENST00000483778 PTPRZ1P23471 2315 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-221ENST00000483778 SMIM28A0A1B0GU29 152 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 KRBA1A5PL33 1030 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 ABLIM1O14639 778 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 SLC16A4O15374 487 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 CFHP08603 1231 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 LAMP2P13473 410 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 FGFR3P22607 806 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 BRCC3P46736 316 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
ATG4B-221ENST00000483778 DCAF4L1Q3SXM0 396 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 DTHD1Q6ZMT9 781 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 GRASPQ7Z6J2 395 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-221ENST00000483778 SIX5Q8N196 739 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 TMX3Q96JJ7 454 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 MFSD1Q9H3U5 465 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 IGSF9Q9P2J2 1179 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 ARHGAP28Q9P2N2 729 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 DPP7Q9UHL4 492 aa19.8■□□□□ 0.76
ATG4B-221ENST00000483778 RIF1Q5UIP0 2472 aaKnown RBP19.79■□□□□ 0.76
ATG4B-221ENST00000483778 COL4A3Q01955 1670 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 B3GAT3O94766 335 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 OR1D2P34982 312 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 PRPHP41219 470 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 CLCN5P51795 746 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 UPP1Q16831 310 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 XKR4Q5GH76 650 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 KRT79Q5XKE5 535 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 DCLRE1AQ6PJP8 1040 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 GET4Q7L5D6 327 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-221ENST00000483778 TMEM134Q9H6X4 195 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 KMT5AQ9NQR1 393 aa19.79■□□□□ 0.76
ATG4B-221ENST00000483778 WDR87Q6ZQQ6 2873 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 CFAP54Q96N23 3096 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 ANK1P16157 1881 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 CCL16O15467 120 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 TKTP29401 623 aaKnown RBP19.78■□□□□ 0.76
ATG4B-221ENST00000483778 GRM5P41594 1212 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 RABEP1Q15276 862 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 SEZ6Q53EL9 994 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 ELMSAN1Q6PJG2 1045 aa19.78■□□□□ 0.76
ATG4B-221ENST00000483778 LRRC15Q8TF66 581 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms