RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 GPSM2P81274 684 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 P3H1Q32P28 736 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 NAALADL2Q58DX5 795 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ARMCX2Q7L311 632 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 RNF139Q8WU17 664 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 EME1Q96AY2 570 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 KIF2CQ99661 725 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 GIMAP4Q9NUV9 329 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ADCY3O60266 1144 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 WDR47O94967 919 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 LDHAP00338 332 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ARPP19P56211 112 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 CCDC15Q0P6D6 951 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 PFASO15067 1338 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 CD163L1Q9NR16 1453 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 USP17L5A8MUK1 530 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ENO3P13929 434 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 COPB2P35606 906 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 PRELPP51888 382 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 TRIP10Q15642 601 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ZNF699Q32M78 642 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 TRIM60Q495X7 471 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.09□□□□□ -0.797e-6■■■■□ 20.6
CDK5RAP2-216ENST00000483412 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 SLC9A2Q9UBY0 812 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ITIH6Q6UXX5 1313 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 SLC16A4O15374 487 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 NMT2O60551 498 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 WBP4O75554 376 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 VHLP40337 213 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 CRKP46108 304 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 TRIM28Q13263 835 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 Q3C1V9 767 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 RAD9BQ6WBX8 426 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 SLC35G2Q8TBE7 412 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 ZNF507Q8TCN5 953 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 IFT43Q96FT9 208 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 CCT7Q99832 543 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 EML4Q9HC35 981 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 WDR19Q8NEZ3 1342 aa10.09□□□□□ -0.79
CDK5RAP2-216ENST00000483412 M0QYV0 167 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CYP2D6P10635 497 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PPARGP37231 505 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PYGLP06737 847 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PSMD7P51665 324 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NR1I3Q14994 352 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 C16orf89Q6UX73 402 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CDKL3Q8IVW4 592 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TAGAPQ8N103 731 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ATL2Q8NHH9 583 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CNBD2Q96M20 576 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NLRP4Q96MN2 994 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TEX12Q9BXU0 123 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CCDC134Q9H6E4 229 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TMEM120BA0PK00 339 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 POTEFA5A3E0 1075 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KRT7P08729 469 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 POTEIP0CG38 1075 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CACNB3P54284 484 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SYDE1Q6ZW31 735 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TC2NQ8N9U0 490 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NR1H4Q96RI1 486 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 BEGAINQ9BUH8 593 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SARS2Q9NP81 518 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 STAT3P40763 770 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FXR1P51114 621 aaKnown RBP eCLIP10.08□□□□□ -0.82e-8■■■■■ 27.3
CDK5RAP2-216ENST00000483412 AP3B2Q13367 1082 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RC3H1Q5TC82 1133 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 THNSL1Q8IYQ7 743 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NOA1Q8NC60 698 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 AGPAT5Q9NUQ2 364 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TRIM49P0CI25 452 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TRIM49CP0CI26 452 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TARSP26639 723 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 IFNA8P32881 189 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 GJC2Q5T442 439 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 MDM1Q8TC05 714 aa10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PSMC3IPQ9P2W1 217 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ANXA13P27216 316 aa10.07□□□□□ -0.8
CDK5RAP2-216ENST00000483412 S100A5P33763 92 aa10.07□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CRYMQ14894 314 aa10.07□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NUP93Q8N1F7 819 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms