RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 GLT8D2Q9H1C3 349 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GOLPH3Q9H4A6 298 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SLITRK6Q9H5Y7 841 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SLC38A7Q9NVC3 462 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZDHHC7Q9NXF8 308 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZMAT5Q9UDW3 170 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 MOSPD1Q9UJG1 213 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 PGRMC1O00264 195 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CYTH3O43739 400 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CCDC22O60826 627 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 HAUS5O94927 633 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 UQCRBP14927 111 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SERPINB6P35237 376 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 NOP14P78316 857 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 BTKQ06187 659 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PDK3Q15120 406 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PTPROQ16827 1216 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SFT2D3Q587I9 215 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 HSP90AA5PQ58FG0 334 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 DHRS4L2Q6PKH6 230 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RASSF3Q86WH2 238 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MORC4Q8TE76 937 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 H3BSA7 217 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 GAS8O95995 478 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MSL3P1P0C860 447 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 VCLP18206 1134 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CDH3P22223 829 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PHKA2P46019 1235 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 AP3M2P53677 418 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PLTPP55058 493 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RAB15P59190 212 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RPS3AP61247 264 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 EIF2B5Q13144 721 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RPS6KA1Q15418 735 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MIIPQ5JXC2 388 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 OR7G1Q8NGA0 311 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 OXER1Q8TDS5 423 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CYTH2Q99418 400 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 LIN28AQ9H9Z2 209 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 NDE1Q9NXR1 346 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 USP21Q9UK80 565 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 C15orf38-AP3S2A0A0A6YYH1 394 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 LRRC53A6NM62 1247 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SOBPA7XYQ1 873 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 KLRF2D3W0D1 207 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CCDC188H7C350 402 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 STAM2O75886 525 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 EEF2P13639 858 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 FGFR4P22455 802 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MTIF2P46199 727 aaKnown RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 TUBA4AP68366 448 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PDE1CQ14123 709 aaPredicted RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PCSK7Q16549 785 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 LONRF1Q17RB8 773 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SPDYAQ5MJ70 313 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 FYB2Q5VWT5 728 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PDXDC1Q6P996 788 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PAOXQ6QHF9 649 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ARPINQ7Z6K5 226 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CROCCP2Q86T23 111 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF410Q86VK4 478 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SLC38A6Q8IZM9 456 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 TTC30BQ8N4P2 665 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RNF169Q8NCN4 708 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 TTC1Q99614 292 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MAN1C1Q9NR34 630 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 DBF4Q9UBU7 674 aaPredicted RBP8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ZFP69BQ9UJL9 534 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PCDHGA3Q9Y5H0 932 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 MAD1L1Q9Y6D9 718 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
COL4A5-205ENST00000483338 ARHGAP10A1A4S6 786 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CDK2AP1O14519 115 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 GYG2O15488 501 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 ENO2P09104 434 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 CDH2P19022 906 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-205ENST00000483338 HAND2P61296 217 aa8.29□□□□□ -1.08
COL4A5-205ENST00000483338 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms