RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CACNA1AO00555 2505 aa8.19□□□□□ -1.1
CSDE1-206ENST00000483030 ZNF292O60281 2723 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 DENND4AQ7Z401 1863 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 FAM205CA6NFA0 338 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 XYLBO75191 536 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 REC8O95072 547 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 KIF4AO95239 1232 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 LYPLA2O95372 231 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 C8AP07357 584 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 XBP1P17861 261 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 PRKCQQ04759 706 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 CSTF1Q05048 431 aaKnown RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 MLF2Q15773 248 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 PSMD5Q16401 504 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 AXDND1Q5T1B0 1012 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 MTSS1LQ765P7 747 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 PIGOQ8TEQ8 1089 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 ATRIPQ8WXE1 791 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 CCDC43Q96MW1 224 aaKnown RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 NAP1L4Q99733 375 aaKnown RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 KXD1Q9BQD3 176 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 DDX23Q9BUQ8 820 aaKnown RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 NFKBIZQ9BYH8 718 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 POLR3FQ9H1D9 316 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-206ENST00000483030 CXCL16Q9H2A7 254 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 HCFC1R1Q9NWW0 138 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 NCDNQ9UBB6 729 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 FBXO4Q9UKT5 387 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 PCDHA12Q9UN75 941 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 GPR179Q6PRD1 2367 aa8.18□□□□□ -1.1
CSDE1-206ENST00000483030 WDR87Q6ZQQ6 2873 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 LRRIQ4A6NIV6 560 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 PTGESO14684 152 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 CDKL5O76039 1030 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 THP07101 528 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 NEFLP07196 543 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 IGFBP6P24592 240 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-206ENST00000483030 HOXA9P31269 272 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 OR1D2P34982 312 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 TXKP42681 527 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 RARRES1P49788 294 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 PFKPQ01813 784 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 SCRN1Q12765 414 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 RAB33AQ14088 237 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 ZNF528Q3MIS6 628 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 ZBTB41Q5SVQ8 909 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 NOSTRINQ8IVI9 506 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 SLC7A14Q8TBB6 771 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 ING5Q8WYH8 240 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 FAM212AQ96EL1 285 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 MCRS1Q96EZ8 462 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 BORCS6Q96GS4 357 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 NELL2Q99435 816 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 OSBPL6Q9BZF3 934 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 FZD8Q9H461 694 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-206ENST00000483030 LTB4R2Q9NPC1 389 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 PDRG1Q9NUG6 133 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 DNMT3BQ9UBC3 853 aaKnown RBP8.17□□□□□ -1.1
CSDE1-206ENST00000483030 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 NCOR2Q9Y618 2525 aa8.17□□□□□ -1.1
CSDE1-206ENST00000483030 SPTLC1O15269 473 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 USO1O60763 962 aaKnown RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 RECQL4O94761 1208 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 XRCC6P12956 609 aaKnown RBP eCLIP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 LIG1P18858 919 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ATXN1P54253 815 aaKnown RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ELAVL2Q12926 359 aaKnown RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 NR5A1Q13285 461 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 CALCRLQ16602 461 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 OTOGLQ3ZCN5 2332 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PABPC1LQ4VXU2 614 aaKnown RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 C2orf16Q68DN1 1984 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PDXDC1Q6P996 788 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 TSSK4Q6SA08 328 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 NPAS3Q8IXF0 933 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ZBTB44Q8NCP5 570 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PRIMPOLQ96LW4 560 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 CNTNAP3BQ96NU0 1288 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 CNTNAP3Q9BZ76 1288 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PLA2G2FQ9BZM2 168 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 TM6SF1Q9BZW5 370 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PDZD7Q9H5P4 517 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PRMT7Q9NVM4 692 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ZSCAN32Q9NX65 697 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ORC3Q9UBD5 711 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 ZMYM2Q9UBW7 1377 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 MRPS23Q9Y3D9 190 aaKnown RBP8.16□□□□□ -1.1
CSDE1-206ENST00000483030 PCDHGA2Q9Y5H1 932 aa8.16□□□□□ -1.1
CSDE1-206ENST00000483030 I3L4J1 428 aa8.15□□□□□ -1.1
CSDE1-206ENST00000483030 N4BP3O15049 544 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms