RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ANKFY1Q9P2R3 1169 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 FAM50BQ9Y247 325 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 TCF20Q9UGU0 1960 aaKnown RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
COL16A1-213ENST00000482910 VCANP13611 3396 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 H3BQ06 376 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-213ENST00000482910 TMEM189-UBE2V1I3L0A0 370 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 PER2O15055 1255 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 LINC01565O15544 149 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 LILRB3O75022 631 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 KCNE1P15382 129 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 NDUFV1P49821 464 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 NUCB2P80303 420 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-213ENST00000482910 COASYQ13057 564 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-213ENST00000482910 PTPN14Q15678 1187 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 ADALQ6DHV7 355 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 DHX58Q96C10 678 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 SPATA32Q96LK8 384 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 UROC1Q96N76 676 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-213ENST00000482910 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 SLC38A7Q9NVC3 462 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 CNTN3Q9P232 1028 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 ADAM28Q9UKQ2 775 aa16.52■□□□□ 0.24
COL16A1-213ENST00000482910 A0A0B4J269 797 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 SMIM28A0A1B0GU29 152 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 OGTO15294 1046 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 POLR2DO15514 142 aaKnown RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CLTAP09496 248 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 IDEP14735 1019 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CMA1P23946 247 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 SLFN12LQ6IEE8 588 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 PTCRAQ6ISU1 281 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 FUT10Q6P4F1 479 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 EP400NLQ6ZTU2 488 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 PPFIBP1Q86W92 1011 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 ADAMTS19Q8TE59 1207 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 TRIM9Q9C026 710 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 MRPL17Q9NRX2 175 aaKnown RBP16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CHST7Q9NS84 486 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CLEC1BQ9P126 229 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 CD207Q9UJ71 328 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 PCDHB13Q9Y5F0 798 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 STYXL1Q9Y6J8 313 aa16.51■□□□□ 0.23
COL16A1-213ENST00000482910 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 FAM189A1O60320 539 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 TADA2AO75478 443 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 URODP06132 367 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 HARSP12081 509 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 OSTNP61366 133 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 POU5F1Q01860 360 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 DSG1Q02413 1049 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 ELAVL2Q12926 359 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 SLC10A6Q3KNW5 377 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 ZC2HC1CQ53FD0 456 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 SMRP1Q8NCR6 262 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 VN1R2Q8NFZ6 395 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 CASP10Q92851 521 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 DDX27Q96GQ7 796 aaKnown RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 UHRF1Q96T88 793 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-213ENST00000482910 C7orf25Q9BPX7 421 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 EXOC7Q9UPT5 735 aa16.5■□□□□ 0.23
COL16A1-213ENST00000482910 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 TTC26A0AVF1 554 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 CASTOR2A6NHX0 329 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 F8W810 466 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 MBTPS2O43462 519 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 C1RP00736 705 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 ADRB2P07550 413 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 GLUD2P49448 558 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 POSTNQ15063 836 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 USP41Q3LFD5 358 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
COL16A1-213ENST00000482910 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 DCLRE1AQ6PJP8 1040 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 AUTS2Q8WXX7 1259 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 ACCSQ96QU6 501 aa16.49■□□□□ 0.23
COL16A1-213ENST00000482910 PAAF1Q9BRP4 392 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms