RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 MAGEA9P43362 315 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 AARSP49588 968 aaKnown RBP eCLIP9.76□□□□□ -0.85
CALD1-220ENST00000482470 STAT5BP51692 787 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 BACE1P56817 501 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 SLC20A2Q08357 652 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 BSPRYQ5W0U4 402 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 PCNX4Q63HM2 1172 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 LLGL2Q6P1M3 1020 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 CTAGE3PQ8IX95 158 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 SRRM1Q8IYB3 904 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 CYFIP2Q96F07 1278 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 RUNDC3BQ96NL0 473 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 IGSF9BQ9UPX0 1349 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 AGPSO00116 658 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 VWA5AO00534 786 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 EGFRP00533 1210 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 RFX1P22670 979 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ATP5DP30049 168 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 CNTN2Q02246 1040 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ZBTB16Q05516 673 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ORC1Q13415 861 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SLMAPQ14BN4 828 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 MAPK6Q16659 721 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 KYNUQ16719 465 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 PPP1R21Q6ZMI0 780 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 FAM83AQ86UY5 434 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ERICH1Q86X53 443 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 EFCC1Q9HA90 598 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 CYP26B1Q9NR63 512 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 GEMIN8Q9NWZ8 242 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 DIS3Q9Y2L1 958 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 PFASO15067 1338 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SYNJ2BP-COX16A0A087WUM0 186 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 WDR91A4D1P6 747 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 PHF2O75151 1096 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 EIF3BP55884 814 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 MRPS9P82933 396 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 ITIH3Q06033 890 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 MAPK7Q13164 816 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 NUGGCQ68CJ6 796 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 PARD3BQ8TEW8 1205 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ZNF473Q8WTR7 871 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 ALG3Q92685 438 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 TRIM6Q9C030 488 aaPredicted RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 GDF3Q9NR23 364 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 COX16Q9P0S2 106 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 INTUQ9ULD6 942 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 FAM187AA6NFU0 413 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 CAND2O75155 1236 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 LCA5LO95447 670 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ANXA13P27216 316 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 HHATQ5VTY9 493 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SLFN12LQ6IEE8 588 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 FAM47EQ6ZV65 393 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SLC13A5Q86YT5 568 aaPredicted RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 C4orf19Q8IY42 314 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 CCDC197Q8NCU1 140 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 GIMAP7Q8NHV1 300 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ATP8B4Q8TF62 1192 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 TCP11Q8WWU5 503 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 CAVIN3Q969G5 261 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SEMA4AQ9H3S1 761 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SAYSD1Q9NPB0 183 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ANKEF1Q9NU02 776 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 NCOA4Q13772 614 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 DHX34Q14147 1143 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 ZNF568Q3ZCX4 644 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 CCDC63Q8NA47 563 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ARHGEF2Q92974 986 aaKnown RBP9.75□□□□□ -0.85
CALD1-220ENST00000482470 EPN3Q9H201 632 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 FAM53CQ9NYF3 392 aa9.75□□□□□ -0.85
CALD1-220ENST00000482470 UBE4BO95155 1302 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 FRMD3A2A2Y4 597 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 RNF8O76064 485 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 FKBP1AP62942 108 aaKnown RBP9.74□□□□□ -0.85
CALD1-220ENST00000482470 CDR2Q01850 454 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 C6orf118Q5T5N4 469 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 EPM2AIP1Q7L775 607 aaPredicted RBP9.74□□□□□ -0.85
CALD1-220ENST00000482470 PALM2Q8IXS6 379 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 RBBP8NLQ8NC74 664 aaPredicted RBP9.74□□□□□ -0.85
CALD1-220ENST00000482470 HSPH1Q92598 858 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 TRIM11Q96F44 468 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 RBAK-RBAKDNI3L0D1 243 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 PGK2P07205 417 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 RALAP11233 206 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 KRT10P13645 584 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 PSMA2P25787 234 aa9.74□□□□□ -0.85
CALD1-220ENST00000482470 NOP14P78316 857 aaKnown RBP9.74□□□□□ -0.85
CALD1-220ENST00000482470 BASP1P80723 227 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms