RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NOP14P78316 857 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 RCN2Q14257 317 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 BZW1Q7L1Q6 419 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 ADAM7Q9H2U9 754 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 C12orf65Q9H3J6 166 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 ATP2A1O14983 1001 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 PAEPP09466 180 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 CCND1P24385 295 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 CPA2P48052 419 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 CLK2P49760 499 aaKnown RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 CCNHP51946 323 aaPredicted RBP13.54□□□□□ -0.24
VPS52-218ENST00000482399 GPS1Q13098 491 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 CCHCR1Q8TD31 782 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 STMN2Q93045 179 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
VPS52-218ENST00000482399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.241e-8■■■■■ 28.6
VPS52-218ENST00000482399 TTC4O95801 387 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 BAG2O95816 211 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 EPHB2P29323 1055 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 PTGIRP43119 386 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 WLSQ5T9L3 541 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 TRMT10CQ7L0Y3 403 aaKnown RBP13.53□□□□□ -0.24
VPS52-218ENST00000482399 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 ARMC2Q8NEN0 867 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 FAM213AQ9BRX8 229 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 UNC45AQ9H3U1 944 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 TRABDQ9H4I3 376 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 C1orf112Q9NSG2 853 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
VPS52-218ENST00000482399 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 CDH16O75309 829 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 PSMC4P43686 418 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 PPP1R21Q6ZMI0 780 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 GRK7Q8WTQ7 553 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 CYTH2Q99418 400 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 WDR18Q9BV38 432 aa13.53□□□□□ -0.24
VPS52-218ENST00000482399 IQCGQ9H095 443 aaKnown RBP13.53□□□□□ -0.24
VPS52-218ENST00000482399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS52-218ENST00000482399 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
VPS52-218ENST00000482399 MAPK13O15264 365 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 ENTPD5O75356 428 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 LGR5O75473 907 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 BBOX1O75936 387 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 GSTA1P08263 222 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 POU5F1Q01860 360 aaKnown RBP13.52□□□□□ -0.24
VPS52-218ENST00000482399 MPP2Q14168 576 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 BBS9Q3SYG4 887 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 HYIQ5T013 277 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 C1orf186Q6ZWK4 172 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 MYLK2Q9H1R3 596 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 PHTF1Q9UMS5 762 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 COL18A1P39060 1754 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 LRRD1A4D1F6 860 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 BANF1O75531 89 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 ETS1P14921 441 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 CYP11B1P15538 503 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 SREBF1P36956 1147 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 SPARCL1Q14515 664 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 OTOP1Q7RTM1 612 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.24
VPS52-218ENST00000482399 TTC17Q96AE7 1141 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 CENPTQ96BT3 561 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 NINJ2Q9NZG7 142 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.24
VPS52-218ENST00000482399 CACNA1SQ13698 1873 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
VPS52-218ENST00000482399 ANXA13P27216 316 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 MAGEA4P43358 317 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 NT5C2P49902 561 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 IRX4P78413 519 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 EMC10Q5UCC4 262 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 ADAM22Q9P0K1 906 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
VPS52-218ENST00000482399 ZFP69BQ9UJL9 534 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 PCDHB4Q9Y5E5 795 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 MYH1P12882 1939 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 MYH4Q9Y623 1939 aa13.52□□□□□ -0.25
VPS52-218ENST00000482399 DCCP43146 1447 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 O00370 1275 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 KRT1P04264 644 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms