RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 COL4A3Q01955 1670 aa11.45□□□□□ -0.58
DDX39B-220ENST00000482195 CEP250Q9BV73 2442 aa11.45□□□□□ -0.58
DDX39B-220ENST00000482195 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■□□□□ 11.3
DDX39B-220ENST00000482195 B4GALT5O43286 388 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 USO1O60763 962 aaKnown RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 DTNBO60941 627 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 TADA2AO75478 443 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 LAMP2P13473 410 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 ARF4P18085 180 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 FSHRP23945 695 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 EVCP57679 992 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PTENP60484 403 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 MBTD1Q05BQ5 628 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 HTR4Q13639 388 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PCBP1Q15365 356 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■□□□ 14.4
DDX39B-220ENST00000482195 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PPP4R3AQ6IN85 833 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 DCLRE1AQ6PJP8 1040 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 HAS1Q92839 578 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PHF20Q9BVI0 1012 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 FOXQ1Q9C009 403 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 POLR3FQ9H1D9 316 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 XPNPEP1Q9NQW7 623 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 PDRG1Q9NUG6 133 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX39B-220ENST00000482195 SIT1Q9Y3P8 196 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 DMXL1Q9Y485 3027 aa11.44□□□□□ -0.58
DDX39B-220ENST00000482195 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 CASTOR2A6NHX0 329 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 SMAPO00193 183 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 TBX3O15119 743 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 CCL16O15467 120 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 HSP90AA2PQ14568 343 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-220ENST00000482195 SLC27A1Q6PCB7 646 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 MAEAQ7L5Y9 396 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 DGLUCYQ7Z3D6 616 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 GRASPQ7Z6J2 395 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-220ENST00000482195 HDAC7Q8WUI4 952 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 EIF2AK1Q9BQI3 630 aaKnown RBP11.43□□□□□ -0.58
DDX39B-220ENST00000482195 RHOBTB2Q9BYZ6 727 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 SEMA4AQ9H3S1 761 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 BRMS1Q9HCU9 246 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 DNAH14Q0VDD8 3507 aa11.43□□□□□ -0.58
DDX39B-220ENST00000482195 DGAT1O75907 488 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 SP9P0CG40 484 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 LIG1P18858 919 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 GLRA2P23416 452 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 KRT2P35908 639 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 NTHL1P78549 312 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 SCRN1Q12765 414 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 UBXN2BQ14CS0 331 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 PSMD5Q16401 504 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 CALCRLQ16602 461 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 RTP2Q5QGT7 225 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 PPM1LQ5SGD2 360 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 C1orf210Q8IVY1 113 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 PJA1Q8NG27 643 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 RMDN1Q96DB5 314 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-220ENST00000482195 FNIP2Q9P278 1114 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 FBXW11Q9UKB1 542 aa11.42□□□□□ -0.58
DDX39B-220ENST00000482195 STK36Q9NRP7 1315 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 ANHXE9PGG2 379 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 KINO60870 393 aaKnown RBP11.41□□□□□ -0.58
DDX39B-220ENST00000482195 XYLBO75191 536 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 LRRN2O75325 713 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 KIF4AO95239 1232 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 EFEMP2O95967 443 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 C8AP07357 584 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 SPIRE1Q08AE8 756 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
DDX39B-220ENST00000482195 EARS2Q5JPH6 523 aaKnown RBP11.41□□□□□ -0.58
DDX39B-220ENST00000482195 FAM171A1Q5VUB5 890 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 PHLDB3Q6NSJ2 640 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 PARM1Q6UWI2 310 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 MTSS1LQ765P7 747 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 ZBTB8OSQ8IWT0 167 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 PIGOQ8TEQ8 1089 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 FGF14Q92915 247 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 SHDQ96IW2 340 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 KXD1Q9BQD3 176 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 PAAF1Q9BRP4 392 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 SLC2A4RGQ9NR83 387 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
DDX39B-220ENST00000482195 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms