RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 ASNSP08243 561 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 AKAP5P24588 427 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 NMIQ13287 307 aaPredicted RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 ACAP2Q15057 778 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 RRP12Q5JTH9 1297 aaKnown RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 ERAP2Q6P179 960 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 CATIPQ7Z7H3 387 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 RASSF3Q86WH2 238 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 C2CD4AQ8NCU7 369 aaPredicted RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 BTBD6Q96KE9 485 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 MCMBPQ9BTE3 642 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 PORCNQ9H237 461 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 RWDD1Q9H446 243 aaPredicted RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 NLRC4Q9NPP4 1024 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 PRDM5Q9NQX1 630 aaPredicted RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 TPX2Q9ULW0 747 aaKnown RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 RABGAP1Q9Y3P9 1069 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 NOC2LQ9Y3T9 749 aaKnown RBP8.66□□□□□ -1.02
LINC00888-203ENST00000482098 LTBP2Q14767 1821 aa8.66□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA12O60330 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 OFD1O75665 1012 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PLS3P13797 630 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 SNRPBP14678 240 aaKnown RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 LSP1P33241 339 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PPM1FP49593 454 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 RAC1P63000 192 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 ZNF174Q15697 407 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 CRY1Q16526 586 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 TRIM60Q495X7 471 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 CCDC174Q6PII3 467 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 CISD2Q8N5K1 135 aaKnown RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 GALNT6Q8NCL4 622 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 VPS37AQ8NEZ2 397 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 KLHDC4Q8TBB5 520 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 SLC35G2Q8TBE7 412 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 LRFN3Q9BTN0 628 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 DDX4Q9NQI0 724 aaKnown RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 CATSPERZQ9NTU4 200 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 H2AFY2Q9P0M6 372 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PA2G4Q9UQ80 394 aaKnown RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA8Q9Y5G5 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA7Q9Y5G6 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA6Q9Y5G7 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA3Q9Y5H0 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PCDHGA2Q9Y5H1 932 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 PHIPQ8WWQ0 1821 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 LOC285556D6RIA3 1793 aa8.65□□□□□ -1.02
LINC00888-203ENST00000482098 DOCK1Q14185 1865 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 GPR75-ASB3A0A0A6YYF3 556 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 SEPT4O43236 478 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 AP1G1O43747 822 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CLTBP09497 229 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CYBAP13498 195 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 RAB6AP20340 208 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 AMPD1P23109 780 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 SERPINB3P29508 390 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 USP11P51784 963 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 AK2P54819 239 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 TLE2Q04725 743 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 FPGSQ05932 587 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 GRB14Q14449 540 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 LAPTM4AQ15012 233 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 OLFML2BQ68BL8 750 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 C1orf228Q6PIY5 440 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
LINC00888-203ENST00000482098 FAM186BQ8IYM0 893 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CPXCR1Q8N123 301 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 SNX27Q96L92 541 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 TOX2Q96NM4 488 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 SENP7Q9BQF6 1050 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 HERPUD2Q9BSE4 406 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 YIPF2Q9BWQ6 316 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 BOCQ9BWV1 1114 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 RNF38Q9H0F5 515 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 SIL1Q9H173 461 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CSRNP2Q9H175 543 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 KLHL11Q9NVR0 708 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 FLRT1Q9NZU1 646 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 CLEC1BQ9P126 229 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.64□□□□□ -1.03
LINC00888-203ENST00000482098 EXOC6BQ9Y2D4 811 aa8.64□□□□□ -1.03
LINC00888-203ENST00000482098 TRBV23OR9-2A0A075B6M9 112 aa8.63□□□□□ -1.03
LINC00888-203ENST00000482098 EYA2O00167 538 aa8.63□□□□□ -1.03
LINC00888-203ENST00000482098 STRNO43815 780 aa8.63□□□□□ -1.03
LINC00888-203ENST00000482098 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
LINC00888-203ENST00000482098 CIAO1O76071 339 aa8.63□□□□□ -1.03
LINC00888-203ENST00000482098 TRAPPC10P48553 1259 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms