RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FGFR1OPO95684 399 aaKnown RBP12.59□□□□□ -0.39
HPS4-212ENST00000481910 STAG3L1P0CL83 205 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 TNFSF9P41273 254 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 CASP4P49662 377 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 MYL5Q02045 173 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 KYAT1Q16773 422 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 ZBTB41Q5SVQ8 909 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 SPATA1Q5VX52 437 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 PSRC1Q6PGN9 363 aaPredicted RBP12.59□□□□□ -0.39
HPS4-212ENST00000481910 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.396e-9■■□□□ 13.1
HPS4-212ENST00000481910 KIAA1586Q9HCI6 787 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 NFE2L3Q9Y4A8 694 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 ZNF233A6NK53 670 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 SMTNL1A8MU46 457 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 BECN2A8MW95 431 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 EFCAB14O75071 495 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 AKAP3O75969 853 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 BAIAP3O94812 1187 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CLTAP09496 248 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 ITGA4P13612 1032 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 AKAP5P24588 427 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 GRM5P41594 1212 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 MAGEA10P43363 369 aaPredicted RBP12.58□□□□□ -0.39
HPS4-212ENST00000481910 FAM189BP81408 668 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 SNRNP35Q16560 246 aaKnown RBP12.58□□□□□ -0.39
HPS4-212ENST00000481910 TMEM240Q5SV17 173 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.39
HPS4-212ENST00000481910 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.58□□□□□ -0.39
HPS4-212ENST00000481910 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 ECHDC2Q86YB7 292 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CBWD2Q8IUF1 395 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CREBRFQ8IUR6 639 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 TMEM192Q8IY95 271 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 HACE1Q8IYU2 909 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 PGBD4Q96DM1 585 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CEP63Q96MT8 703 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CBX8Q9HC52 389 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 PARP2Q9UGN5 583 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.39
HPS4-212ENST00000481910 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.39
HPS4-212ENST00000481910 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 H0YGN5 161 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 EOMESO95936 686 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 FILIP1Q7Z7B0 1213 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 MRPL10Q7Z7H8 261 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 DHX40Q8IX18 779 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 LPPQ93052 612 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 FBXL18Q96ME1 805 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
HPS4-212ENST00000481910 FANCLQ9NW38 375 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 TTC3P53804 2025 aa12.58□□□□□ -0.4
HPS4-212ENST00000481910 MEIS3P2A8K0S8 358 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 IKBKBO14920 756 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 UPP2O95045 317 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 AMHP03971 560 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 KCNJ6P48051 423 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 MRE11P49959 708 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 IQCB1Q15051 598 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 HSP90AA4PQ58FG1 418 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 MKNK1Q9BUB5 465 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 ELAC1Q9H777 363 aaKnown RBP12.57□□□□□ -0.4
HPS4-212ENST00000481910 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
HPS4-212ENST00000481910 SAMSN1Q9NSI8 373 aaKnown RBP12.57□□□□□ -0.4
HPS4-212ENST00000481910 TMEM161AQ9NX61 479 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
HPS4-212ENST00000481910 CITO14578 2027 aa12.57□□□□□ -0.4
HPS4-212ENST00000481910 PPP1R12AO14974 1030 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 COQ9O75208 318 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 RECQL4O94761 1208 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 ADRB2P07550 413 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 CXCL8P10145 99 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 NCAPHQ15003 741 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 CCDC40Q4G0X9 1142 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 AGMOQ6ZNB7 445 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
HPS4-212ENST00000481910 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 THAP9Q9H5L6 903 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
HPS4-212ENST00000481910 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms