RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 INPP5FQ9Y2H2 1132 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MORC2Q9Y6X9 1032 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MTSS1O43312 755 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 VCPP55072 806 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 NLRP14Q86W24 1093 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 KCNK16Q96T55 309 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 GNL1P36915 607 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 BBS7Q8IWZ6 715 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TAF1DQ9H5J8 278 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TUFT1Q9NNX1 390 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 KRCC1Q9NPI7 259 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 NMRK1Q9NWW6 199 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PDK1Q15118 436 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 LLGL1Q15334 1064 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 DAB2IPQ5VWQ8 1189 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TRABDQ9H4I3 376 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 LSM7Q9UK45 103 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MAP3K4Q9Y6R4 1608 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ASB14A6NK59 587 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 KLHL2O95198 593 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 IL18RAPO95256 599 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 C16orf72Q14CZ0 275 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ZFYVE19Q96K21 471 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 RNF17Q9BXT8 1623 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 KDM6AO15550 1401 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 MTFR1Q15390 333 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CDY2AQ9Y6F7 541 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 UBN2Q6ZU65 1347 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CDH6P55285 790 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ADCK1Q86TW2 530 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 GUF1Q8N442 669 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
VEGFA-212ENST00000480614 TMEM161AQ9NX61 479 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 AURKCQ9UQB9 309 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 IMPDH2P12268 514 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ACTR2P61160 394 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 CDYLQ9Y232 598 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
VEGFA-212ENST00000480614 PJA2O43164 708 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 BRAFP15056 766 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 GCLMP48507 274 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 PDIA2Q13087 525 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 KRR1Q13601 381 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 B4GALNT2Q8NHY0 566 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 C10orf88Q9H8K7 445 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ADAM21Q9UKJ8 722 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ATP11BQ9Y2G3 1177 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 GGCXP38435 758 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 PKP1Q13835 747 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 KIF12Q96FN5 646 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 RBBP8Q99708 897 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ANTXR1Q9H6X2 564 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 GID8Q9NWU2 228 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 E4F1Q66K89 784 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 THNSL1Q8IYQ7 743 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ATL2Q8NHH9 583 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 OTULINQ96BN8 352 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 DBNDD1Q9H9R9 158 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 RNF146Q9NTX7 359 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 RBAKQ9NYW8 714 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 KITP10721 976 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 ANXA11P50995 505 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 CSTF3Q12996 717 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 E2F4Q16254 413 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 FAM83BQ5T0W9 1011 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 TTC30BQ8N4P2 665 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 RMDN1Q96DB5 314 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 DHX35Q9H5Z1 703 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 PDHA1P08559 390 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 SLC9A1P19634 815 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 HSPA9P38646 679 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 HIC1Q14526 733 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 CCDC137Q6PK04 289 aaKnown RBP10.04□□□□□ -0.8
VEGFA-212ENST00000480614 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 KCNB1Q14721 858 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 GPD1LQ8N335 351 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 COG1Q8WTW3 980 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 H0Y3Z8 333 aa10.04□□□□□ -0.8
VEGFA-212ENST00000480614 MAGEB2O15479 319 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms