RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 FITM2Q8N6M3 262 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 PAPOLBQ9NRJ5 636 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 LUZP4Q9P127 313 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 CLIC2O15247 247 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 AGTP01019 485 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 COASYQ13057 564 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 PSMD2Q13200 908 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 C21orf62-AS1Q17RA5 79 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 COBLL1Q53SF7 1204 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 FAM26FQ5R3K3 315 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 IRF2BP2Q7Z5L9 587 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 RELL1Q8IUW5 271 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 FAM84AQ96KN4 292 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 CAMKK2Q96RR4 588 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 C6orf50Q9HD87 102 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 ACP6Q9NPH0 428 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 MTMR4Q9NYA4 1195 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 NKX1-2Q9UD57 310 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 SMCHD1A6NHR9 2005 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 LRRD1A4D1F6 860 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 BBOX1O75936 387 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 NUDT17P0C025 328 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 NOS2P35228 1153 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 PAPOLAP51003 745 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 BNIP1Q12981 228 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 SEPT2Q15019 361 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 TAOK1Q7L7X3 1001 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 NT5DC3Q86UY8 548 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 HELQQ8TDG4 1101 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 FBF1Q8TES7 1133 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.677e-14■■■■■ 92.7
COMMD4-203ENST00000480484 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 SEPT11Q9NVA2 429 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 DNAJC17Q9NVM6 304 aaKnown RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 TAS2R14Q9NYV8 317 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 POLG2Q9UHN1 485 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 ZMYND8Q9ULU4 1186 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-203ENST00000480484 DNAH12Q6ZR08 3092 aa10.84□□□□□ -0.67
COMMD4-203ENST00000480484 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 UCHL3P15374 230 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 ATF4P18848 351 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 RAD23BP54727 409 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 NFIAQ12857 509 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 TMEM266Q2M3C6 531 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 KIAA1755Q5JYT7 1200 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 KRT79Q5XKE5 535 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 SPATA21Q7Z572 469 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 VPS36Q86VN1 386 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 SYCE1Q8N0S2 351 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 REXO1Q8N1G1 1221 aaKnown RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 RAD54LQ92698 747 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 DNAJC19Q96DA6 116 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 C18orf8Q96DM3 657 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 RMDN2Q96LZ7 410 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 NELL2Q99435 816 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 GANQ9H2C0 597 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 ZNF287Q9HBT7 754 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 KMT5AQ9NQR1 393 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 METTL5Q9NRN9 209 aaKnown RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 ZDHHC18Q9NUE0 388 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 ZIM2Q9NZV7 527 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 RABGAP1Q9Y3P9 1069 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 CALCAP01258 141 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 MYL3P08590 195 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 PLCG2P16885 1265 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 MARCKSL1P49006 195 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 KLRC3Q07444 240 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 HERC4Q5GLZ8 1057 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 DCAF12L1Q5VU92 463 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 DUPD1Q68J44 220 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 KCTD1Q719H9 257 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 LILRB2Q8N423 598 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 RASGEF1CQ8N431 466 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 HAS1Q92839 578 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 POP1Q99575 1024 aaKnown RBP10.83□□□□□ -0.68
COMMD4-203ENST00000480484 LZTS2Q9BRK4 669 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 TXLNGYQ9BZA5 131 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 PIDD1Q9HB75 910 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 ARHGEF3Q9NR81 526 aa10.83□□□□□ -0.68
COMMD4-203ENST00000480484 TMOD4Q9NZQ9 345 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms