RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 MCM6Q14566 821 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
CDK9-203ENST00000480353 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 KIAA0319Q5VV43 1072 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 PDXDC1Q6P996 788 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 PALB2Q86YC2 1186 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
CDK9-203ENST00000480353 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 UROC1Q96N76 676 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 TTPALQ9BTX7 342 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 CDT1Q9H211 546 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 POMKQ9H5K3 350 aa16.8■□□□□ 0.28
CDK9-203ENST00000480353 C5orf42Q9H799 3197 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 MTCL1Q9Y4B5 1905 aaKnown RBP16.79■□□□□ 0.28
CDK9-203ENST00000480353 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 STX6O43752 255 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 TOM1L1O75674 476 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 B3GAT3O94766 335 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 KIF4AO95239 1232 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 MYBP10242 640 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 LIG4P49917 911 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 NOLC1Q14978 699 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDK9-203ENST00000480353 KRI1Q8N9T8 703 aaKnown RBP16.79■□□□□ 0.28
CDK9-203ENST00000480353 TMEM161BQ8NDZ6 487 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
CDK9-203ENST00000480353 RAD54LQ92698 747 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
CDK9-203ENST00000480353 REEP2Q9BRK0 252 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 PAAF1Q9BRP4 392 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 NTPCRQ9BSD7 190 aaKnown RBP16.79■□□□□ 0.28
CDK9-203ENST00000480353 PIDD1Q9HB75 910 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
CDK9-203ENST00000480353 CLDN3O15551 220 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 LILRB3O75022 631 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
CDK9-203ENST00000480353 SCP2P22307 547 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 ABCD1P33897 745 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 GRIN1Q05586 938 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 RESTQ13127 1097 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 CCDC149Q6ZUS6 474 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 TAS1R3Q7RTX0 852 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 HAUS6Q7Z4H7 955 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
CDK9-203ENST00000480353 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 CEP120Q8N960 986 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 EDAQ92838 391 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 CHST7Q9NS84 486 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 CDH22Q9UJ99 828 aa16.78■□□□□ 0.28
CDK9-203ENST00000480353 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 SMIM28A0A1B0GU29 152 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 HNRNPDLO14979 420 aaKnown RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 SPATA31D3P0C874 917 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 DDIT3P35638 169 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 CLCNKBP51801 687 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 STK38Q15208 465 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 PSMD5Q16401 504 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 ARSHQ5FYA8 562 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 RRAGBQ5VZM2 374 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 ZPBP2Q6X784 338 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 C15orf39Q6ZRI6 1047 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 SPATA31D4Q6ZUB0 917 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 GPR149Q86SP6 731 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 GPR65Q8IYL9 337 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 PPP1R10Q96QC0 940 aaKnown RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 PLEKHA4Q9H4M7 779 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 C11orf16Q9NQ32 467 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 RAPGEFL1Q9UHV5 662 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
CDK9-203ENST00000480353 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.28
CDK9-203ENST00000480353 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.27
CDK9-203ENST00000480353 TRAK2O60296 914 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 NCKAP1LP55160 1127 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 ZXDAP98168 799 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 KYAT1Q16773 422 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.76■□□□□ 0.27
CDK9-203ENST00000480353 OTOP3Q7RTS5 596 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 HDAC7Q8WUI4 952 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 SMG7Q92540 1137 aaKnown RBP16.76■□□□□ 0.27
CDK9-203ENST00000480353 STAMQ92783 540 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
CDK9-203ENST00000480353 SNX27Q96L92 541 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
CDK9-203ENST00000480353 CXCL16Q9H2A7 254 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 PTPRHQ9HD43 1115 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 STK17AQ9UEE5 414 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms