RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GANQ9H2C0 597 aa11.32□□□□□ -0.6
LINC00173-203ENST00000480237 FZD8Q9H461 694 aa11.32□□□□□ -0.6
LINC00173-203ENST00000480237 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
LINC00173-203ENST00000480237 GINS2Q9Y248 185 aa11.32□□□□□ -0.6
LINC00173-203ENST00000480237 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
LINC00173-203ENST00000480237 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 LRRC53A6NM62 1247 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 OGTO15294 1046 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 TREHO43280 583 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 B4GALT5O43286 388 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 CCP110O43303 1012 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 NOL4O94818 638 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 ASGR1P07306 291 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 CST5P28325 142 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 GRK4P32298 578 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 NKX3-2P78367 333 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 CDC42EP1Q00587 391 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 APBA1Q02410 837 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 ENPEPQ07075 957 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 PSMD6Q15008 389 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 KIZQ2M2Z5 673 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 SPAG5Q96R06 1193 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 INTS2Q9H0H0 1204 aaKnown RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 TMEM8AQ9HCN3 771 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
LINC00173-203ENST00000480237 FHOD1Q9Y613 1164 aa11.31□□□□□ -0.6
LINC00173-203ENST00000480237 ALPK3Q96L96 1907 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 P4HA2O15460 535 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
LINC00173-203ENST00000480237 UCHL3P15374 230 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 HOXC8P31273 242 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CLCN1P35523 988 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 ADAM17P78536 824 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
LINC00173-203ENST00000480237 MCL1Q07820 350 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 KCNA10Q16322 511 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 AMHR2Q16671 573 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 C1orf220Q5T0J3 134 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 KLHDC7AQ5VTJ3 777 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 EEF1DP3Q658K8 133 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 KRT39Q6A163 491 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 RNF180Q86T96 592 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
LINC00173-203ENST00000480237 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CCAR2Q8N163 923 aaKnown RBP11.3□□□□□ -0.6
LINC00173-203ENST00000480237 BAP1Q92560 729 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CPB2Q96IY4 423 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 OSMRQ99650 979 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 TMEM117Q9H0C3 514 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
LINC00173-203ENST00000480237 SIX2Q9NPC8 291 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 GTF2IRD1Q9UHL9 959 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 PTCH2Q9Y6C5 1203 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 CEP350Q5VT06 3117 aa11.3□□□□□ -0.6
LINC00173-203ENST00000480237 M0QZ92 97 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 ZSCAN12O43309 604 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 ARF4P18085 180 aaPredicted RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 TNNI1P19237 187 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 RFX1P22670 979 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 PROZP22891 400 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 GTF2H1P32780 548 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 MTF1Q14872 753 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 MEA1Q16626 185 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 SEZ6Q53EL9 994 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 CRELD2Q6UXH1 353 aaPredicted RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 CGRRF1Q99675 332 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 DESI2Q9BSY9 194 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 CDT1Q9H211 546 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 PDZD7Q9H5P4 517 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
LINC00173-203ENST00000480237 DAAM1Q9Y4D1 1078 aa11.29□□□□□ -0.6
LINC00173-203ENST00000480237 PTPRDP23468 1912 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms