RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ECHS1P30084 290 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 GNALP38405 381 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 GJA9P57773 515 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 GBX1Q14549 363 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 PGS1Q32NB8 556 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 MEX3CQ5U5Q3 659 aaKnown RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 ABHD15Q6UXT9 468 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 GPR155Q7Z3F1 870 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 PLEKHH3Q7Z736 793 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 CATIPQ7Z7H3 387 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 DGKHQ86XP1 1220 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 MSL3Q8N5Y2 521 aaKnown RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.36□□□□□ -1.395e-6■□□□□ 9.5
RFC4-212ENST00000479307 HOXB13Q92826 284 aaPredicted RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 RUNDC1Q96C34 613 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 C1GALT1C1Q96EU7 318 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 MVB12AQ96EY5 273 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 TOX2Q96NM4 488 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 TAAR9Q96RI9 348 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 C1orf112Q9NSG2 853 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 SLC4A7Q9Y6M7 1214 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 NKTRP30414 1462 aaKnown RBP6.35□□□□□ -1.39
RFC4-212ENST00000479307 ARHGAP23Q9P227 1491 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 ARHGAP6O43182 974 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 TOX4O94842 621 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 GYPEP15421 78 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 CRHR1P34998 444 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 KCNC1P48547 511 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 ADCY7P51828 1080 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 HGFACQ04756 655 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 SP8Q8IXZ3 490 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 KBTBD2Q8IY47 623 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
RFC4-212ENST00000479307 CYFIP2Q96F07 1278 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
RFC4-212ENST00000479307 MANSC1Q9H8J5 431 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 BCO1Q9HAY6 547 aa6.35□□□□□ -1.39
RFC4-212ENST00000479307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.35□□□□□ -1.39
RFC4-212ENST00000479307 C8AP07357 584 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 IL12RB1P42701 662 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 BPIFB4P59827 614 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 ZNF267Q14586 743 aaPredicted RBP6.34□□□□□ -1.39
RFC4-212ENST00000479307 VMACQ2NL98 169 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 ARHGAP29Q52LW3 1261 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 THEMIS2Q5TEJ8 643 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 GGT6Q6P531 493 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 OR7D4Q8NG98 312 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 TLR9Q9NR96 1032 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 PTPN22Q9Y2R2 807 aa6.34□□□□□ -1.39
RFC4-212ENST00000479307 CEP350Q5VT06 3117 aa6.34□□□□□ -1.4
RFC4-212ENST00000479307 CAMSAP2Q08AD1 1489 aa6.34□□□□□ -1.4
RFC4-212ENST00000479307 BCL9LQ86UU0 1499 aa6.34□□□□□ -1.4
RFC4-212ENST00000479307 SPAG9O60271 1321 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 AFF2P51816 1311 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 H3BML4 177 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 SLC16A6O15403 523 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 NOBOXO60393 691 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 CTNND1O60716 968 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 PER3P56645 1201 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 RBM6P78332 1123 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 DUSP2Q05923 314 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 SEPT2Q15019 361 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 KRT40Q6A162 431 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 Q6ZVL8 140 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 CCAR1Q8IX12 1150 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 GRAMD1CQ8IYS0 662 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 LGI4Q8N135 537 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 OR2I1PQ8NGU4 316 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 RABGGTAQ92696 567 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 DPF2Q92785 391 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 ING3Q9NXR8 418 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 GPRC5DQ9NZD1 345 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 PUF60Q9UHX1 559 aaKnown RBP6.33□□□□□ -1.4
RFC4-212ENST00000479307 NR2E1Q9Y466 385 aa6.33□□□□□ -1.4
RFC4-212ENST00000479307 CCDC194A0A1B0GVG4 234 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 B4GALT3O60512 393 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 ADSLP30566 484 aaPredicted RBP6.32□□□□□ -1.4
RFC4-212ENST00000479307 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
RFC4-212ENST00000479307 SURF1Q15526 300 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 ZNF124Q15973 351 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 TBR1Q16650 682 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 DENND1CQ8IV53 801 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 RHOT1Q8IXI2 618 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 DRC7Q8IY82 874 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 CAMKK1Q8N5S9 505 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 ANKRD53Q8N9V6 530 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 OR14K1Q8NGZ2 314 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms