RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 GSTA1P08263 222 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 MYBL1P10243 752 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 SLC1A1P43005 524 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 KRT76Q01546 638 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 CBWD2Q8IUF1 395 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 OGFOD1Q8N543 542 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 TMEM161BQ8NDZ6 487 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 IL31RAQ8NI17 732 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 DDX1Q92499 740 aaKnown RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 RAB20Q9NX57 234 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 PKD2L1Q9P0L9 805 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 CCT8L1PA6NM43 557 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 WDR64B1ANS9 1081 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 DNM1LO00429 736 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 BACH1O14867 736 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 CNGA1P29973 690 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 ATP5DP30049 168 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 ADSSP30520 456 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 SCTRP47872 440 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 GCNT1Q02742 428 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 AUHQ13825 339 aaKnown RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 ZYXQ15942 572 aaKnown RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 CLEC16AQ2KHT3 1053 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 ZNF677Q86XU0 584 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 MTMR14Q8NCE2 650 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 SYTL5Q8TDW5 730 aaPredicted RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 GRK7Q8WTQ7 553 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 LPAR1Q92633 364 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 SERPINB12Q96P63 405 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 HOMER3Q9NSC5 361 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 ZNF219Q9P2Y4 722 aaPredicted RBP19.36■□□□□ 0.69
CCM2-209ENST00000477605 NFIBO00712 420 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 WDR46O15213 610 aaKnown RBP19.35■□□□□ 0.69
CCM2-209ENST00000477605 ABCD1P33897 745 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 IFI35P80217 286 aaPredicted RBP19.35■□□□□ 0.69
CCM2-209ENST00000477605 XRCC4Q13426 336 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 PPP1R7Q15435 360 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 XRRA1Q6P2D8 792 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCM2-209ENST00000477605 CCDC91Q7Z6B0 441 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 MAGEC3Q8TD91 643 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 DHX38Q92620 1227 aaKnown RBP19.35■□□□□ 0.69
CCM2-209ENST00000477605 TCEAL9Q9UHQ7 104 aa19.35■□□□□ 0.69
CCM2-209ENST00000477605 TCRBV7S2A1N4TA0A589 114 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 PTP4A2Q12974 167 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 DMP1Q13316 513 aaPredicted RBP19.34■□□□□ 0.69
CCM2-209ENST00000477605 XKR9Q5GH70 373 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 FAM102BQ5T8I3 360 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 ZSWIM2Q8NEG5 633 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 SAMD15Q9P1V8 674 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 GOLGA8IPA6NC78 632 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 GOLGA8JA6NMD2 632 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 ANKRD63C9JTQ0 380 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 ATMINO43313 823 aaPredicted RBP19.34■□□□□ 0.69
CCM2-209ENST00000477605 NPTX2P47972 431 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 SPP2Q13103 211 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 SGO2Q562F6 1265 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 SENP7Q9BQF6 1050 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 TACO1Q9BSH4 297 aaKnown RBP19.34■□□□□ 0.69
CCM2-209ENST00000477605 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCM2-209ENST00000477605 SMCHD1A6NHR9 2005 aa19.34■□□□□ 0.69
CCM2-209ENST00000477605 MYH11P35749 1972 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 DKC1O60832 514 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCM2-209ENST00000477605 TCEA3O75764 348 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 GARTP22102 1010 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 FGFR4P22455 802 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 BPIFB4P59827 614 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 CYP24A1Q07973 514 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 PTK6Q13882 451 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 KCTD19Q17RG1 926 aaPredicted RBP19.33■□□□□ 0.69
CCM2-209ENST00000477605 RHBDF2Q6PJF5 856 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 OTUD6AQ7L8S5 288 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 RPAINQ86UA6 219 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 FUKQ8N0W3 1084 aa19.33■□□□□ 0.69
CCM2-209ENST00000477605 IPO4Q8TEX9 1081 aaKnown RBP19.33■□□□□ 0.69
CCM2-209ENST00000477605 MAPK4P31152 587 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 RTP1P59025 263 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 PGM5Q15124 567 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 CNGA2Q16280 664 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 UGCGQ16739 394 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
CCM2-209ENST00000477605 TAS1R2Q8TE23 839 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 EPS8L3Q8TE67 593 aaKnown RBP19.32■□□□□ 0.68
CCM2-209ENST00000477605 CCDC127Q96BQ5 260 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 SNF8Q96H20 258 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 SLC38A10Q9HBR0 1119 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 KMT5AQ9NQR1 393 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 GINM1Q9NU53 330 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 KCNG1Q9UIX4 513 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 DENND3A2RUS2 1198 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 GAS8O95995 478 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 CENPCQ03188 943 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 KRT17Q04695 432 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 NBPF9Q3BBW0 867 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 LRRC34Q8IZ02 419 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 BBOF1Q8ND07 529 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms