RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KRT37O76014 449 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CDKL5O76039 1030 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 REC8O95072 547 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 LRG1P02750 347 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 THP07101 528 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 SDHBP21912 280 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GLRA2P23416 452 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 OR1D2P34982 312 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 ARPP19P56211 112 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 TOB2Q14106 344 aaPredicted RBP7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CALCRLQ16602 461 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GLRA4Q5JXX5 417 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 ZBTB41Q5SVQ8 909 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CENPQQ7L2Z9 268 aaPredicted RBP7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 SLFN12Q8IYM2 578 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 MAML2Q8IZL2 1156 aaPredicted RBP7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 PIGOQ8TEQ8 1089 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 HAS1Q92839 578 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CLSTN3Q9BQT9 956 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 ADPGKQ9BRR6 497 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 AGXT2Q9BYV1 514 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 BRMS1Q9HCU9 246 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 LTB4R2Q9NPC1 389 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GPRC5CQ9NQ84 441 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 HEBP1Q9NRV9 189 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GJB4Q9NTQ9 266 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 SNTG2Q9NY99 539 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GMEB2Q9UKD1 530 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 FBXO4Q9UKT5 387 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 GDAQ9Y2T3 454 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 PCDHGA2Q9Y5H1 932 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CDY1Q9Y6F8 540 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 CACNA1BQ00975 2339 aa7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF638Q14966 1978 aaKnown RBP7.39□□□□□ -1.23
RTFDC1-206ENST00000477485 DCDC2BA2VCK2 349 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM205CA6NFA0 338 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 I3L4J1 428 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PRRG1O14668 218 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 N4BP3O15049 544 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 TBX3O15119 743 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ADAM12O43184 909 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 RECQL4O94761 1208 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 SLITRK3O94933 977 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 EFEMP2O95967 443 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ATP2B1P20020 1258 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 TARSP26639 723 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 KRT2P35908 639 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 TXKP42681 527 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 LMNB2Q03252 620 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ELAVL2Q12926 359 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PRPF4BQ13523 1007 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 GRM2Q14416 872 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 NPY5RQ15761 445 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 AMHR2Q16671 573 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF528Q3MIS6 628 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PDXDC1Q6P996 788 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF852Q6ZMS4 543 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 NPAS3Q8IXF0 933 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 FBXL16Q8N461 479 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 GPR161Q8N6U8 529 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 LNX1Q8TBB1 728 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 OXER1Q8TDS5 423 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PIK3R5Q8WYR1 880 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 KCNB2Q92953 911 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF274Q96GC6 653 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 CHAMP1Q96JM3 812 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 TTC12Q9H892 705 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 BRD9Q9H8M2 597 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ANKEF1Q9NU02 776 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PRMT7Q9NVM4 692 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ZSCAN32Q9NX65 697 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 DLL3Q9NYJ7 618 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 DNMT3BQ9UBC3 853 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 PCDHA12Q9UN75 941 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 USP20Q9Y2K6 914 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 MRPS17Q9Y2R5 130 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 ANK1P16157 1881 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 COL4A2P08572 1712 aa7.38□□□□□ -1.23
RTFDC1-206ENST00000477485 NCOR2Q9Y618 2525 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 TCHHQ07283 1943 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 A0A1B0GUA9 196 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PRR5-ARHGAP8B1AHC4 643 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PTGESO14684 152 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 B3GAT3O94766 335 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 C1RP00736 705 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PRKCBP05771 671 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 RHOP08100 348 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 CEBPBP17676 345 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 TKTP29401 623 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 HOXA9P31269 272 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 ELF1P32519 619 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 ARL2P36404 184 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms