RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 DDX3XO00571 662 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 ADAMTS3O15072 1205 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 PEX10O60683 326 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CYP7B1O75881 506 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 ENDOD1O94919 500 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 FSBPO95073 299 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 LY86O95711 162 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 KNG1P01042 644 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CHGBP05060 677 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 IFIT1P09914 478 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 LTA4HP09960 611 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CTSSP25774 331 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 ADSLP30566 484 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 MAP2K6P52564 334 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 FOXO4P98177 505 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 DSC2Q02487 901 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CD69Q07108 199 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 PMS2P11Q13670 270 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 PRKG1Q13976 671 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 SEPT2Q15019 361 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 DACT2Q5SW24 774 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 FKBP15Q5T1M5 1219 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 GJC2Q5T442 439 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CIAPIN1Q6FI81 312 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CFAP161Q6P656 301 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 TRMT10BQ6PF06 316 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 TTC7BQ86TV6 843 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 MSL3Q8N5Y2 521 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 KYQ8NBH2 561 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 IL17REQ8NFR9 667 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 PPP1R14CQ8TAE6 165 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 MZB1Q8WU39 189 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 FAM168AQ92567 244 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 UBXN10Q96LJ8 280 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 ZSCAN31Q96LW9 406 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 NOX5Q96PH1 765 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 DIRC2Q96SL1 478 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 SEC62Q99442 399 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 BTBD1Q9H0C5 482 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 EPB41L4BQ9H329 900 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 NSUN3Q9H649 340 aaKnown RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 ZNF287Q9HBT7 754 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 KIAA1586Q9HCI6 787 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 DCP1AQ9NPI6 582 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CLIC5Q9NZA1 410 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 LRFN1Q9P244 771 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CDC42EP3Q9UKI2 254 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 PADI4Q9UM07 663 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 CRYL1Q9Y2S2 319 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 AFG3L2Q9Y4W6 797 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 RPTORQ8N122 1335 aa4.93□□□□□ -1.62
VPS13D-207ENST00000476169 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 EIF3FO00303 357 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 N4BP3O15049 544 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 SLC16A6O15403 523 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 PHF2O75151 1096 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 SKAP2O75563 359 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 PAPLNO95428 1278 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 HNRNPLP14866 589 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 RRM1P23921 792 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 IGFBP6P24592 240 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 ECHS1P30084 290 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 COPB2P35606 906 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 STAT5BP51692 787 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 KCNQ1P51787 676 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 EPHB3P54753 998 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 NUCB1Q02818 461 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 ZNF543Q08ER8 600 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 SMAD4Q13485 552 aaKnown RBP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 ARTNQ5T4W7 220 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 IGDCC3Q8IVU1 814 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 BCL6BQ8N143 479 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS13D-207ENST00000476169 ZBTB8AQ96BR9 441 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 APIPQ96GX9 242 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 TMEM41AQ96HV5 264 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 PPP1R16BQ96T49 567 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 MANSC1Q9H8J5 431 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 TDP1Q9NUW8 608 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 PCDHB1Q9Y5F3 818 aa4.92□□□□□ -1.62
VPS13D-207ENST00000476169 TEX51A0A1B0GUA7 166 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 LRRC14BA6NHZ5 514 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 APOL1O14791 398 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 FFAR2O15552 330 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 DAPK3O43293 454 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 SGTAO43765 313 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 PARP1P09874 1014 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 DHRS4L1P0CG22 281 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 GAAP10253 952 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 BRAFP15056 766 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 LIMS1P48059 325 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 EIF5P55010 431 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 PER3P56645 1201 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 RAB1AP62820 205 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 CDC42EP1Q00587 391 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms