RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 CXCL17Q6UXB2 119 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 Q7L0L9 218 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 REC114Q7Z4M0 266 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 RALYLQ86SE5 291 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 SESTD1Q86VW0 696 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ENAHQ8N8S7 591 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 OR6J1Q8NGC5 347 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 NSUN6Q8TEA1 469 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 CLEC4DQ8WXI8 215 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 HERVK_113Q902F9 699 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 FAM168AQ92567 244 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 TIFAQ96CG3 184 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 SLC9A7Q96T83 725 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MTG1Q9BT17 334 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 WDR11Q9BZH6 1224 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ALDH8A1Q9H2A2 487 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 CEP131Q9UPN4 1083 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MRPL11Q9Y3B7 192 aaKnown RBP4.82□□□□□ -1.64
VPS13D-206ENST00000476045 CORINQ9Y5Q5 1042 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 MUC6Q6W4X9 2439 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 WDR81Q562E7 1941 aa4.82□□□□□ -1.64
VPS13D-206ENST00000476045 FRMPD4Q14CM0 1322 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 SYCE3A1L190 88 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 DHX16O60231 1041 aaKnown RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 GREM1O60565 184 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 CAND2O75155 1236 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 STAM2O75886 525 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 DDAH1O94760 285 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 GH1P01241 217 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 ESR1P03372 595 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 CPA1P15085 419 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 CALML3P27482 149 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 GDNFP39905 211 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 STXBP2Q15833 593 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 TMEM240Q5SV17 173 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 CWC27Q6UX04 472 aaKnown RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 RASGRP2Q7LDG7 609 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 TMPRSS7Q7RTY8 843 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 PPTC7Q8NI37 304 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 AFAP1L1Q8TED9 768 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 MAP3K14Q99558 947 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 CDX2Q99626 313 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 DPH2Q9BQC3 489 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.81□□□□□ -1.643e-6■□□□□ 9.5
VPS13D-206ENST00000476045 AMNQ9BXJ7 453 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 GPR62Q9BZJ7 368 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 VTI1BQ9UEU0 232 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 PCDHA11Q9Y5I1 949 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 SNX14Q9Y5W7 946 aa4.81□□□□□ -1.64
VPS13D-206ENST00000476045 ARID1BQ8NFD5 2236 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-206ENST00000476045 EMSYQ7Z589 1322 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 XIRP2A4UGR9 3374 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 B4E1Z4 1266 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 H3BS24 57 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ZBTB5O15062 677 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 B4GALT4O60513 344 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 DNAJA2O60884 412 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 EIF3JO75822 258 aaKnown RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ATE1O95260 518 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 HTR3BO95264 441 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 BPNT1O95861 308 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 MBD3O95983 291 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 F2P00734 622 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 FGBP02675 491 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 RPLP2P05387 115 aaKnown RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 C8AP07357 584 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 MMP3P08254 477 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 TXNP10599 105 aaKnown RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 TGFB3P10600 412 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 CSF2RAP15509 400 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 CASTP20810 708 aaKnown RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ITGB8P26012 769 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 KIF5BP33176 963 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 HSPA4P34932 840 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 SLC16A2P36021 539 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 HSD17B4P51659 736 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 AK2P54819 239 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ANAPC15P60006 121 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 BEX3Q00994 111 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 GRM4Q14833 912 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 DGKDQ16760 1214 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 QRICH1Q2TAL8 776 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 USH1GQ495M9 461 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 XRRA1Q6P2D8 792 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 FAM43BQ6ZT52 329 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ZSCAN30Q86W11 494 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 ZSWIM9Q86XI8 627 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 DTWD2Q8NBA8 298 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 BHLHE22Q8NFJ8 381 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-206ENST00000476045 NCOA7Q8NI08 942 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 PHOSPHO2Q8TCD6 241 aa4.8□□□□□ -1.64
VPS13D-206ENST00000476045 SYTL5Q8TDW5 730 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms