RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PTK6Q13882 451 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 R3HDM1Q15032 1099 aaKnown RBP18.93■□□□□ 0.62
CCM2-207ENST00000475551 IRGCQ6NXR0 463 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 MTHFD1LQ6UB35 978 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 FAM136AQ96C01 138 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 BCAS3Q9H6U6 928 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 PHTF1Q9UMS5 762 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 IGKV6D-41A0A0C4DH26 115 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 LRRN2O75325 713 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 ASMTLO95671 621 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 SP100P23497 879 aaPredicted RBP18.93■□□□□ 0.62
CCM2-207ENST00000475551 TM4SF1P30408 202 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 STAT4Q14765 748 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 NBPF5PQ86XG9 351 aaPredicted RBP18.93■□□□□ 0.62
CCM2-207ENST00000475551 RIBC1Q8N443 379 aaPredicted RBP18.93■□□□□ 0.62
CCM2-207ENST00000475551 CCDC77Q9BR77 488 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 BHMT2Q9H2M3 363 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 VCXQ9H320 206 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 TLE6Q9H808 572 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 DMAC2Q9NW81 257 aa18.93■□□□□ 0.62
CCM2-207ENST00000475551 COL24A1Q17RW2 1714 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 SPOPO43791 374 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 ECE2O60344 883 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 CHRNB2P17787 502 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 ITGA8P53708 1063 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 TMEM63BQ5T3F8 832 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 TTBK2Q6IQ55 1244 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 SEPT14Q6ZU15 432 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 LMO3Q8TAP4 145 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 DENND2DQ9H6A0 471 aaPredicted RBP18.92■□□□□ 0.62
CCM2-207ENST00000475551 WDR35Q9P2L0 1181 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 TBK1Q9UHD2 729 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 EPHB2P29323 1055 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 MAN1A1P33908 653 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 SLC5A9Q2M3M2 681 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 SGO2Q562F6 1265 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 RPUSD2Q8IZ73 545 aaKnown RBP18.92■□□□□ 0.62
CCM2-207ENST00000475551 NLGN1Q8N2Q7 840 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 ZNF333Q96JL9 665 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 TRAIPQ9BWF2 469 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 C2CD2Q9Y426 696 aa18.92■□□□□ 0.62
CCM2-207ENST00000475551 SORBS3O60504 671 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 TRIM49P0CI25 452 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 TRIM49CP0CI26 452 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 DLATP10515 647 aaKnown RBP18.91■□□□□ 0.62
CCM2-207ENST00000475551 GZMAP12544 262 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 TNIP1Q15025 636 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 PDCD2Q16342 344 aaPredicted RBP18.91■□□□□ 0.62
CCM2-207ENST00000475551 Q4G0T1 1027 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
CCM2-207ENST00000475551 ZNF804AQ7Z570 1209 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 RELL1Q8IUW5 271 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 SUPT20HQ8NEM7 779 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 TTC8Q8TAM2 541 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 CRYGNQ8WXF5 182 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 IKZF4Q9H2S9 585 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 UBN1Q9NPG3 1134 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 STOML1Q9UBI4 398 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 UBE4BO95155 1302 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 RASA4BC9J798 803 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 USP17L10C9JJH3 530 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 MAP3K13O43283 966 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 RASA4O43374 803 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 PTPN4P29074 926 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 SLC18A1P54219 525 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 MUM1Q2TAK8 710 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 C1orf54Q8WWF1 131 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 PSPC1Q8WXF1 523 aaKnown RBP18.91■□□□□ 0.62
CCM2-207ENST00000475551 MAML1Q92585 1016 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCM2-207ENST00000475551 LNPEPQ9UIQ6 1025 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 RABGAP1Q9Y3P9 1069 aa18.91■□□□□ 0.62
CCM2-207ENST00000475551 HNRNPCL1O60812 293 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 MUTP22033 750 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 NMT1P30419 496 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 RHBDL3P58872 404 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 NR1H3Q13133 447 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 DNAJC3Q13217 504 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 SNX1Q13596 522 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 OR52E8Q6IFG1 317 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 RINT1Q6NUQ1 792 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 ZNF564Q8TBZ8 553 aaPredicted RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 DENND1AQ8TEH3 1009 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 GRK7Q8WTQ7 553 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 IFT43Q96FT9 208 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 POLR3CQ9BUI4 534 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms